Information on SUBCLASS 5.7.1 |
Subclass Accession number: 7943
Subclass: 5.7.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 38.3 +/- 31.9 Average RMSD (Å) : 0.467 +/- 0.082 Consensus geometry
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Consensus Sequence: | hVXpXPhhh |
(φψ)-conformation: | bbapbwpbb |
Pattern: | [ACST] | [AV] | [IV] | [ft] | [EKQS] | x | [P] | [IP] | [IMY] | [GI] | [ITV] | [CIT] |
Conservation: | -0.370 | 0.075 | 0.889 | -0.548 | -0.261 | -0.903 | 2.831 | -0.310 | -0.267 | -0.767 | -0.038 | -0.332 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aog_A_364 | 1aog | A | 364 | 375 | SAVFSIPPIGTC | EEE--SS-EEEE | bbbaxbwxbbbb |
1fec_A_363 | 1fec | A | 363 | 374 | CAVFSIPPMGVC | EEE--SS-EEEE | bbbaxbwxbbbb |
1fmk_*_325 | 1fmk | - | 327 | 338 | AVVSEEPIYIVT | EEE-SSS-EEEE | bbbapbbxbbbb |
1onf_A_382 | 1onf | A | 382 | 393 | TVIFSHPPIGTI | EEE--SS-EEEE | bbxaxbwxbbbb |
1qcf_A_325 | 1qcf | A | 327 | 338 | AVVTKEPIYIIT | EEE-SSS-EEEE | bbbabxwxbbxb |
1qpc_A_303 | 1qpc | A | 305 | 316 | AVVTQEPIYIIT | EEE-SSS-EEEE | bbbabxwxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aog_A_364 | 1aog | A | FADFLAVIN-ADENINE DINUCLEOTIDE | A - 365 |
1aog_A_364 | 1aog | A | FADFLAVIN-ADENINE DINUCLEOTIDE | F - 367 |
1fec_A_363 | 1fec | A | FADFLAVIN-ADENINE DINUCLEOTIDE | A - 364 |
1fec_A_363 | 1fec | A | FADFLAVIN-ADENINE DINUCLEOTIDE | F - 366 |
1onf_A_382 | 1onf | A | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 383 |
1onf_A_382 | 1onf | A | FADFLAVIN-ADENINE DINUCLEOTIDE | F - 385 |
1qcf_A_325 | 1qcf | A | PP11-TER-BUTYL-3-P-TOLYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE | L - 325 |
1qcf_A_325 | 1qcf | A | PP11-TER-BUTYL-3-P-TOLYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE | I - 336 |
1qcf_A_325 | 1qcf | A | PP11-TER-BUTYL-3-P-TOLYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE | I - 337 |
1qcf_A_325 | 1qcf | A | PP11-TER-BUTYL-3-P-TOLYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE | T - 338 |
1qpc_A_303 | 1qpc | A | EDO1,2-ETHANEDIOL | I - 314 |
1qpc_A_303 | 1qpc | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | T - 316 |
1qpc_A_303 | 1qpc | A | EDO1,2-ETHANEDIOL | T - 316 |
1qpc_A_303 | 1qpc | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | E - 317 |
Clusters included in this Subclass |
CLUSTER: HA.4.60 |
CLUSTER: HA.6.36 |