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Information on SUBCLASS 5.21.1
Subclass Accession number: 7959
Subclass: 5.21.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 10.0 +/- 13.6
Average RMSD (Å) : 0.833 +/- 0.351

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: pXXhXXXXh
(φψ)-conformation: bpppllabb
Pattern: [RT]x[GKT][AP][GNR][DEG][AEN][EG][LVY]x
Conservation:0.888-1.555-1.0201.737-0.0830.184-0.6190.551-0.083-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bxo_A_41bxo   A918TPTANDEEYIEE-GGGS-EEbxxpvlabbb
1wht_A_691wht   A7079RVKPRGAGLVEE-GGG--EEbxxpvlabbb
2ayq_A_1482ayq   A148156RRGPGENEV.EESSTT-EE.bxxwllabb.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bxo_A_41bxo   A     MANALPHA-D-MANNOSE G - 4
1bxo_A_41bxo   A     MANALPHA-D-MANNOSE V - 5
1bxo_A_41bxo   A     MANALPHA-D-MANNOSE A - 6
1bxo_A_41bxo   A     MANALPHA-D-MANNOSE T - 7
1bxo_A_41bxo   A     MANALPHA-D-MANNOSE N - 8
1bxo_A_41bxo   A     PP7METHYL CYCLO[(2S)-2-[[(1R)-1-(N-(L-N-(3-METHYLBUTANOYL)VALYL-L-ASPARTYL)AMINO)-3-METHYLBUTYL] HYDROXYPHOSPHINYLOXY]-3-(3-AMINOMETHYL)PHENYLPROPANOATE N - 13
1bxo_A_41bxo   A     PP7METHYL CYCLO[(2S)-2-[[(1R)-1-(N-(L-N-(3-METHYLBUTANOYL)VALYL-L-ASPARTYL)AMINO)-3-METHYLBUTYL] HYDROXYPHOSPHINYLOXY]-3-(3-AMINOMETHYL)PHENYLPROPANOATE E - 15
1bxo_A_41bxo   A     PP7METHYL CYCLO[(2S)-2-[[(1R)-1-(N-(L-N-(3-METHYLBUTANOYL)VALYL-L-ASPARTYL)AMINO)-3-METHYLBUTYL] HYDROXYPHOSPHINYLOXY]-3-(3-AMINOMETHYL)PHENYLPROPANOATE E - 16
1bxo_A_41bxo   A     MANALPHA-D-MANNOSE P - 20

Clusters included in this Subclass
CLUSTER: HA.6.62