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Information on SUBCLASS 5.25.1
Subclass Accession number: 7963
Subclass: 5.25.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 4.8 +/- 6.6
Average RMSD (Å) : 1.033 +/- 0.351

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: pXXXXXpXh
(φψ)-conformation: bbpplpabb
Pattern: x[IY]x[KST]xxxxx[KQ]x[AIV]x[GTV]
Conservation:0.0192.027-0.6970.377-0.697-0.816-0.577-0.2200.0192.159-0.5770.615-0.935-0.697
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1h1d_A_1891h1d   A193206HYSSYLEYMKVVDGEEEEE-TTSSSEEEbbxbbppvbaxxbb
1mu5_A_1271mu5   A128141EIETSPVNSKRIYTEEEEE-TT-SEEEEbbbbbppvxabbbb
1oac_A_371oac   A3750AYVKVKPGAQTAIVEEEEE-TT-SEEEEbbbbbbxvxabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h1d_A_1891h1d   A     BIA1-(3,4,DIHYDROXY-5-NITROPHENYL)-3-{4-[3-(TRIFLUOROMETHYL) PHENYL] PIPERAZIN-1-YL}PROPAN-1-ONE L - 198
1h1d_A_1891h1d   A     MGMAGNESIUM ION E - 199
1h1d_A_1891h1d   A     SAMS-ADENOSYLMETHIONINE E - 199
1h1d_A_1891h1d   A     BIA1-(3,4,DIHYDROXY-5-NITROPHENYL)-3-{4-[3-(TRIFLUOROMETHYL) PHENYL] PIPERAZIN-1-YL}PROPAN-1-ONE E - 199
1h1d_A_1891h1d   A     BIA1-(3,4,DIHYDROXY-5-NITROPHENYL)-3-{4-[3-(TRIFLUOROMETHYL) PHENYL] PIPERAZIN-1-YL}PROPAN-1-ONE M - 201
1h1d_A_1891h1d   A     BIA1-(3,4,DIHYDROXY-5-NITROPHENYL)-3-{4-[3-(TRIFLUOROMETHYL) PHENYL] PIPERAZIN-1-YL}PROPAN-1-ONE D - 205
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h1d_A_1891h1d   A BIABIA BINDING SITE FOR CHAIN AL - 198

Clusters included in this Subclass
CLUSTER: HA.5.116