Information on SUBCLASS 6.2.1 |
Subclass Accession number: 7969
Subclass: 6.2.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 11.9 +/- 18.2 Average RMSD (Å) : 0.671 +/- 0.327 Consensus geometry
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Consensus Sequence: | XXXXXppXXX |
(φψ)-conformation: | bbppgbapbb |
Pattern: | x | x | x | [agpsv] | [dgnrst] | [ekqrst] | [dgnqrt] | x | x | x |
Conservation: | -1.186 | -0.058 | -0.390 | 0.918 | 0.912 | 1.515 | 0.973 | -0.998 | -0.620 | -1.067 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c0t_B_60 | 1c0t | B | 63 | 72 | IKKKDSTKWR | EE-TT--SEE | bbpplbaxxb |
1e6v_A_74 | 1e6v | A | 75 | 84 | YQVSGTDVFV | EEBTTS--EE | bxppvbabbb |
1e6y_A_1086 | 1e6y | A | 1086 | 1095 | YTISGTDIVC | EEBTTS--EE | bbxpvbaxxb |
1hbn_A_71 | 1hbn | A | 72 | 81 | YQVSTTDTYV | EEBTTSS-EE | bxxxvbaxbb |
1i52_A_141 | 1i52 | A | 143 | 152 | RAEPGKNAIA | EE-TTSSSEE | bxxpvbabxa |
1krh_A_144 | 1krh | A | 147 | 156 | VTLPGTTETR | EE-TTSS-EE | xxxpvbaxbb |
1l9m_A_420 | 1l9m | A | 424 | 433 | TKAVGSNARM | EE-TTSS-EE | bxxxvbaxxx |
1lf2_A_236 | 1lf2 | A | 237 | 246 | IKVPFLPFYV | EE-SSS--EE | bxxpgxaxbb |
1m6k_A_208 | 1m6k | A | 216 | 225 | GFTANRTLQN | EE-TTSS-EE | bxxpvbaxbb |
1nek_A_123 | 1nek | A | 124 | 133 | KNFGGEQAAR | EE-TTSSSEE | xxbxgbabxa |
1o7d_D_697 | 1o7d | D | 702 | 711 | RLYPRQRHLE | EE-TT-SSEE | bbxwvbabbx |
1pin_A_11 | 1pin | A | 14 | 23 | RMSRSSGRVY | EE-TTS--EE | bbxxvbaxxb |
1qhw_A_139 | 1qhw | A | 143 | 152 | FKVPRSNITV | EE-SSS--EE | bbxpGpapbb |
1vrt_B_60 | 1vrt | B | 63 | 72 | IKKKDSTKWR | EE-TTSS-EE | bxxxlbabxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.6.11 |