Information on SUBCLASS 6.9.1 |
Subclass Accession number: 7980
Subclass: 6.9.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 12.2 +/- 14.6 Average RMSD (Å) : 1.186 +/- 0.318 Consensus geometry
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Consensus Sequence: | XppXpXpXhh |
(φψ)-conformation: | bbaapappbb |
Pattern: | [apsv] | [aklv] | [fmv] | [ACIMY] | x | [CDENS] | [AEKQRS] | [AKNS] | [ENST] | [DEGNQ] | [EKRT] | x | [ilv] | [GIVW] | [akmtv] | x |
Conservation: | -0.630 | -0.556 | 0.331 | -0.166 | -1.325 | 0.834 | 0.350 | 0.775 | 1.132 | 0.668 | 1.738 | -1.420 | 1.047 | -0.743 | -0.518 | -1.516 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fiz_A_198 | 1fiz | A | 198 | 213 | PLMCRDRAENTFVVVG | EEEEE-TT-SS-EEEE | xbbbebaaxabxbxab |
1flg_A_128 | 1flg | A | 128 | 143 | SVVALNKNTGKVVWKK | EEEEEESSS--EEEEE | bbbbbxaabaxxabbb |
1flg_A_79 | 1flg | A | 79 | 94 | RLFALDAKTGKRLWTY | EEEEEESSS--EEEEE | bbbbbxaaxaxxabbb |
1ihp_*_383 | 1ihp | - | 386 | 401 | VEMMQCQAEQEPLVRV | EEEEEESS-SS-EEEE | bbbbbbaaxaxxbbbb |
1lpf_A_401 | 1lpf | A | 402 | 417 | VKVIADAKTDRVLGVH | EEEEEESSS-BEEEEE | bbbbbxaaxaxxabbb |
1qsm_A_56 | 1qsm | A | 58 | 73 | AAVAVESSSEKIIGMI | EEEEEESSS--EEEEE | bbbxbxaabaxxabbb |
4kbp_A_56 | 4kbp | A | 56 | 71 | AVRYWSEKNGRKRIAK | EEEEEESSS---EEEE | xbbbbxaaxaxxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
4kbp_A_56 | 4kbp | A | NAGN-ACETYL-D-GLUCOSAMINE | K - 71 |
Clusters included in this Subclass |
CLUSTER: HA.4.129 |
CLUSTER: HA.6.26 |