Information on SUBCLASS 6.10.1 |
Subclass Accession number: 7981
Subclass: 6.10.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 9.3 +/- 10.4 Average RMSD (Å) : 1.060 +/- 0.371 Consensus geometry
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Consensus Sequence: | XXpppcXXhp |
(φψ)-conformation: | bbapllppbb |
Pattern: | x | x | [fmtv] | [ntv] | [ent] | [enrs] | [DGKR] | [GNS] | x | x | [IV] | [ERSY] | x | [AEGP] |
Conservation: | -0.611 | -0.798 | -0.536 | -0.318 | -0.264 | -0.498 | 0.090 | 1.740 | -0.986 | 0.059 | 2.651 | -0.165 | -0.461 | 0.096 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eag_A_261 | 1eag | A | 262 | 275 | VVFNFSKNAKISVP | EEEE-STT-EEEEE | bbbbabllxbbbbp |
1g8p_A_172 | 1g8p | A | 172 | 185 | ENVVERDGLSIRHP | EEEE--TT--EEEE | bbbbablvbbxbbx |
1h09_A_290 | 1h09 | A | 292 | 305 | YYMTNERGNMVSNE | EEEE-GGG--EEEE | bbbbaplvxxbbxb |
1je0_A_34 | 1je0 | A | 37 | 50 | KLTNENRGFLVYTG | EEEE-GGG--EEEE | bxabapUvxxbbbb |
1k23_A_202 | 1k23 | A | 204 | 217 | AKEFTLGSKKVEIA | EEEE-GGG--EEEE | bbxbaxvvxxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1k23_A_202 | 1k23 | A | MSESELENOMETHIONINE | L - 209 |
1k23_A_202 | 1k23 | A | MSESELENOMETHIONINE | G - 210 |
1k23_A_202 | 1k23 | A | MSESELENOMETHIONINE | S - 211 |
1k23_A_202 | 1k23 | A | MSESELENOMETHIONINE | K - 212 |
1k23_A_202 | 1k23 | A | MSESELENOMETHIONINE | V - 214 |
Clusters included in this Subclass |
CLUSTER: HA.5.51 |