Logo
Information on SUBCLASS 6.11.1
Subclass Accession number: 7982
Subclass: 6.11.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 31.9 +/- 22.0
Average RMSD (Å) : 0.525 +/- 0.320

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 90-135 rho (°): 270-315
Consensus Sequence: phXShXhGXh
(φψ)-conformation: bbpbabpgbb
Pattern: [ET]x[EKLM][S][GPV]xx[G]x[AFIM]x[AILM]
Conservation:0.117-0.608-0.7781.350-0.687-0.662-0.1692.5890.027-0.623-0.242-0.314
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eyb_A_2991eyb   A302313TAKSVRPGVAIAEEE-SSTT-EEEbbxxaxpvbxab
1llp_*_2241llp   -224235EVESGMAGEIRIEE-BSSTT--EEbbxbabpvbxbb
1lyc_A_2311lyc   A231242EELSPFPGEFRMEE-BSSTT--EEbbxbwbpgxbbx
1qpa_A_2241qpa   A224235TVMSPLKGEMRLEE-BSSBT--EEbbxbabxvbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eyb_A_2991eyb   A     MSESELENOMETHIONINE A - 311
1eyb_A_2991eyb   A     MSESELENOMETHIONINE I - 312
1eyb_A_2991eyb   A     MSESELENOMETHIONINE A - 313
1eyb_A_2991eyb   A     MSESELENOMETHIONINE D - 314
1eyb_A_2991eyb   A     MSESELENOMETHIONINE F - 315
1eyb_A_2991eyb   A     MSESELENOMETHIONINE V - 316
1llp_*_2241llp   *     MANALPHA-D-MANNOSE A - 230
1llp_*_2241llp   *     MANALPHA-D-MANNOSE G - 231
1llp_*_2241llp   *     MANALPHA-D-MANNOSE E - 232
1llp_*_2241llp   *     HEMPROTOPORPHYRIN IX CONTAINING FE I - 235
1lyc_A_2311lyc   A     CACALCIUM ION M - 242
1lyc_A_2311lyc   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 242
1qpa_A_2241qpa   A     MANALPHA-D-MANNOSE P - 228
1qpa_A_2241qpa   A     MANALPHA-D-MANNOSE L - 229
1qpa_A_2241qpa   A     MANALPHA-D-MANNOSE K - 230
1qpa_A_2241qpa   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 235
1qpa_A_2241qpa   A     CACALCIUM ION L - 235

Clusters included in this Subclass
CLUSTER: HA.7.22
CLUSTER: HA.8.22