Information on SUBCLASS 6.11.1 |
Subclass Accession number: 7982
Subclass: 6.11.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 31.9 +/- 22.0 Average RMSD (Å) : 0.525 +/- 0.320 Consensus geometry
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Consensus Sequence: | phXShXhGXh |
(φψ)-conformation: | bbpbabpgbb |
Pattern: | [ET] | x | [EKLM] | [S] | [GPV] | x | x | [G] | x | [AFIM] | x | [AILM] |
Conservation: | 0.117 | -0.608 | -0.778 | 1.350 | -0.687 | -0.662 | -0.169 | 2.589 | 0.027 | -0.623 | -0.242 | -0.314 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eyb_A_299 | 1eyb | A | 302 | 313 | TAKSVRPGVAIA | EEE-SSTT-EEE | bbxxaxpvbxab |
1llp_*_224 | 1llp | - | 224 | 235 | EVESGMAGEIRI | EE-BSSTT--EE | bbxbabpvbxbb |
1lyc_A_231 | 1lyc | A | 231 | 242 | EELSPFPGEFRM | EE-BSSTT--EE | bbxbwbpgxbbx |
1qpa_A_224 | 1qpa | A | 224 | 235 | TVMSPLKGEMRL | EE-BSSBT--EE | bbxbabxvbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | A - 311 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | I - 312 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | A - 313 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | D - 314 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | F - 315 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | V - 316 |
1llp_*_224 | 1llp | * | MANALPHA-D-MANNOSE | A - 230 |
1llp_*_224 | 1llp | * | MANALPHA-D-MANNOSE | G - 231 |
1llp_*_224 | 1llp | * | MANALPHA-D-MANNOSE | E - 232 |
1llp_*_224 | 1llp | * | HEMPROTOPORPHYRIN IX CONTAINING FE | I - 235 |
1lyc_A_231 | 1lyc | A | CACALCIUM ION | M - 242 |
1lyc_A_231 | 1lyc | A | HEMPROTOPORPHYRIN IX CONTAINING FE | M - 242 |
1qpa_A_224 | 1qpa | A | MANALPHA-D-MANNOSE | P - 228 |
1qpa_A_224 | 1qpa | A | MANALPHA-D-MANNOSE | L - 229 |
1qpa_A_224 | 1qpa | A | MANALPHA-D-MANNOSE | K - 230 |
1qpa_A_224 | 1qpa | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 235 |
1qpa_A_224 | 1qpa | A | CACALCIUM ION | L - 235 |
Clusters included in this Subclass |
CLUSTER: HA.7.22 |
CLUSTER: HA.8.22 |