Information on SUBCLASS 6.20.1 |
Subclass Accession number: 7991
Subclass: 6.20.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 0.0 +/- 0.0 Average RMSD (Å) : 0.800 +/- 0.000 Consensus geometry
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Consensus Sequence: | XXXpXXXhXX |
(φψ)-conformation: | bbaapabpbb |
Pattern: | [IV] | [CK] | x | [LV] | [RT] | [AT] | [NV] | [EF] | [EQ] | [AT] | [FK] | [SV] | [MP] | [SV] | x | [KM] | [LV] |
Conservation: | 1.891 | 0.169 | -1.554 | 0.743 | 0.169 | 0.456 | -0.980 | -0.692 | 1.891 | 0.456 | -0.692 | -0.980 | 0.169 | -0.980 | -0.980 | 0.169 | 0.743 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f5a_A_143 | 1f5a | A | 143 | 159 | VKDLRAVEEAFVPVIKL | EEEEEEETTSSS-EEEE | xbvxbxbaaxabwbbbb |
1lvm_A_108 | 1lvm | A | 109 | 125 | ICLVTTNFQTKSMSSMV | EEEEEEE-SSSS-EEEE | bbbbbbxaaxabpbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f5a_A_143 | 1f5a | A | 3AT3'-DEOXYADENOSINE-5'-TRIPHOSPHATE | V - 154 |
1f5a_A_143 | 1f5a | A | 3AT3'-DEOXYADENOSINE-5'-TRIPHOSPHATE | V - 156 |
1f5a_A_143 | 1f5a | A | MNMANGANESE (II) ION | K - 158 |
1f5a_A_143 | 1f5a | A | 3AT3'-DEOXYADENOSINE-5'-TRIPHOSPHATE | K - 158 |
1f5a_A_143 | 1f5a | A | 3POTRIPHOSPATE | K - 158 |
Clusters included in this Subclass |
CLUSTER: HA.5.84 |