Information on SUBCLASS 7.1.1 |
Subclass Accession number: 803
Subclass: 7.1.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>75 %) 1.1.1 (>75 %) GO : GO:0046914 (>50 %) SCOP : 50128 (>75 %) 50129 (>75 %) 50136 (>75 %) |
Number of loops: 13 Average sequence ID (%) : 13.3 +/- 14.5 Average RMSD (Å) : 0.977 +/- 0.428 Consensus geometry
|
Consensus Sequence: | hpXXcXXpXXX |
(φψ)-conformation: | bbppgbappbb |
Pattern: | x | [fgiklv] | x | x | x | [dgn] | [adgknst] | [adnrst] | x | [denps] | x | x | x |
Conservation: | -0.879 | -0.207 | -0.488 | -0.654 | -0.279 | 3.084 | -0.327 | -0.167 | 0.209 | 0.436 | -0.223 | -0.691 | 0.185 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fx2_A_1083 | 1fx2 | A | 1088 | 1100 | DVALRGVSDPVKM | EE--TT-SS-EEE | bbxbxgxabxbxb |
1hqz_1_65 | 1hqz | 1 | 70 | 82 | RVSPPGSDVEKII | EE--TT-S--EEE | bbbxxgbaxbbbb |
1knz_A_125 | 1knz | A | 126 | 138 | VKRIPGKSSSIIK | EE--TT-SS-EEE | bbbxpgxaxbbbb |
1mx1_A_1036 | 1mx1 | A | 1037 | 1049 | FVSLEGFAQPVAI | EE--TT-SS-EEE | xbxbpgbaxxxxb |
1ny5_A_259 | 1ny5 | A | 259 | 270 | KFYRLGGRKEIE. | EE--BT--S-EE. | bbbxxvbaxpbb. |
1oey_A_392 | 1oey | A | 393 | 404 | SYRPRDSNELVP. | EE--TT-SS-EE. | bbxxpvbaxxbx. |
1ow1_A_3608 | 1ow1 | A | 3613 | 3625 | NVPNPGSNQPAYV | EE--TT--S--EE | xbxxpvbaxwabb |
1q9i_A_232 | 1q9i | A | 233 | 245 | VGMMGGASVNRAH | EE--TT-SS--EE | bbxbxvbabxNxx |
1qas_A_353 | 1qas | A | 353 | 365 | IIYHGYTFTSKIL | EES-TTS----EE | bbbxpvbaxpbbx |
1qo8_A_227 | 1qo8 | A | 228 | 240 | LKRSGGARVDRTH | EE--TT-SS--EE | bbbbpvxabxaxb |
1stm_A_70 | 1stm | A | 75 | 87 | RLYNPGDTDSVHA | EE--TT-SS-SEE | bxbxxvxabxabb |
1utc_A_198 | 1utc | A | 203 | 215 | QFKMEGNAEESTL | EE--TT-SS-EEE | xbbxxvxabpxxx |
3pmg_A_170 | 3pmg | A | 173 | 185 | QFDLENKFKPFTV | EE--TT-SS-EEE | bbxxplbaxxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mx1_A_1036 | 1mx1 | A | SIAO-SIALIC ACID | F - 1050 |
1mx1_A_1036 | 1mx1 | A | SIAO-SIALIC ACID | L - 1051 |
1mx1_A_1036 | 1mx1 | A | SIAO-SIALIC ACID | G - 1052 |
1mx1_A_1036 | 1mx1 | A | SIAO-SIALIC ACID | I - 1053 |
1mx1_A_1036 | 1mx1 | A | SIAO-SIALIC ACID | P - 1054 |
1ny5_A_259 | 1ny5 | A | PO4PHOSPHATE ION | K - 259 |
1ny5_A_259 | 1ny5 | A | PO4PHOSPHATE ION | F - 260 |
1ny5_A_259 | 1ny5 | A | PO4PHOSPHATE ION | Y - 261 |
1ny5_A_259 | 1ny5 | A | PO4PHOSPHATE ION | R - 262 |
1ny5_A_259 | 1ny5 | A | GOLGLYCEROL | R - 266 |
1ny5_A_259 | 1ny5 | A | GOLGLYCEROL | K - 267 |
1ny5_A_259 | 1ny5 | A | PO4PHOSPHATE ION | I - 269 |
1oey_A_392 | 1oey | A | MSESELENOMETHIONINE | Y - 394 |
1oey_A_392 | 1oey | A | MSESELENOMETHIONINE | R - 395 |
1q9i_A_232 | 1q9i | A | FADFLAVIN-ADENINE DINUCLEOTIDE | M - 236 |
1q9i_A_232 | 1q9i | A | TEOMALATE LIKE INTERMEDIATE | M - 236 |
1qo8_A_227 | 1qo8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | R - 241 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1qo8_A_227 | 1qo8 | A | AC3HEM BINDING SITE FOR RESDIUE A603 | D - 227 |
Clusters included in this Subclass |
CLUSTER: HA.10.5 |
CLUSTER: HA.7.27 |
CLUSTER: HA.8.4 |