Information on SUBCLASS 10.5.1 |
Subclass Accession number: 8035
Subclass: 10.5.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 78.8 +/- -41.4 Average RMSD (Å) : 0.167 +/- 0.058 Consensus geometry
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Consensus Sequence: | TREGXppXhcSGLA |
(φψ)-conformation: | bbaebaabplpebb |
Pattern: | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x |
Conservation: | -0.110 | -0.353 | 0.859 | 3.283 | 0.375 | 0.375 | 0.375 | 0.859 | -1.564 | -0.716 | -0.959 | -1.443 | -0.959 | -0.595 | -0.110 | 0.859 | -0.110 | -0.110 | -0.110 | -0.110 | -0.110 | 0.375 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e43_A_408 | 1e43 | A | 408 | 429 | IVGWTREGDSSVANSGLAALIT | EEEEEE---TTSTT--EEEEEE | xbbbbbaebaabplxebbbbbb |
1hvx_A_408 | 1hvx | A | 408 | 429 | IIGWTREGVTEKPGSGLAALIT | EEEEEE--BTTBTT--EEEEEE | xbbbbbaebaabpvxebbbbbb |
1vjs_*_408 | 1vjs | - | 408 | 429 | IVGWTREGDSSVANSGLAALIT | EEEEEE--BTTBTT--EEEEEE | bbbbbbaebaabpUxebbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e43_A_408 | 1e43 | A | CACALCIUM ION | E - 414 |
1e43_A_408 | 1e43 | A | CACALCIUM ION | N - 421 |
1e43_A_408 | 1e43 | A | CACALCIUM ION | S - 422 |
Clusters included in this Subclass |
CLUSTER: HA.9.15 |