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Information on SUBCLASS 12.3.1
Subclass Accession number: 8043
Subclass: 12.3.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 66.8 +/- 21.9
Average RMSD (Å) : 0.287 +/- 0.113

Consensus geometry
d (Å): 3 delta (°): 45-90 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: RLGEHNIpVXEGpEQF
(φψ)-conformation: bblpapaabpagapbb
Pattern: [EQT][V][r][AL][G][E][DH][N][I][ADEKN][v][ltv][E][g][NST][E][Q][FK][iv][DNS][ASV][asv][KR][iv][I]x
Conservation:-0.5000.660-0.844-0.5901.7791.2190.6341.7790.660-1.051-0.776-1.2541.219-0.094-0.3621.2191.219-0.534-0.940-0.241-0.860-1.1050.384-0.7300.660-1.554
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a0j_A_641a0j   A6489QVRLGEHNIAVNEGTEQFIDSVKVIMEEEES-SBSSS--S--EEEEEEEEEExxbbvxabaabxavaxbbbxxabbbx
1f7z_A_641f7z   A6489QVRLGEHNINVLEGNEQFVNAAKIIKEEEES-SBTTS--S--EEEEEEEEEEbxbbvxaxaabxagaxbbbxxabbbx
1fni_A_641fni   A6489QVRLGEHNIDVLEGNEQFINAAKIITEEEES-SBTTS--S--EEEEEEEEEExxbbvxaxaabxagaxbbbxxabbbx
1h4w_A_641h4w   A6489QVRLGEHNIKVLEGNEQFINAVKIIREEEES-SBTTS--S--EEEEEEEEEEbxbbvxaxaabxagaxbbbxxabbbx
1hj8_A_641hj8   A6489EVRLGEHNIKVTEGSEQFISSSRVIREEEES-SBTTS--S--EEEEEEEEEExxbbvxabaabxavaxbbbxxabbbx
1hj9_A_641hj9   A6489QVRLGEDNINVVEGNEQFISASKSIVEEEES-SSTTS--S--EEEEEEEEEEbxbbvxaxaabxagaxbbbxxabbbx
1rfn_A_651rfn   A6590TVVAGEHNIEETEHTEQKRNVIRIIPEEEES-SBSSS--S--EEEEEEEEEEbbbbvxaxaabbavaxbxbbxabbbx
1trn_A_641trn   A6489QVRLGEHNIEVLEGNEQFINAAKIIREEEES-SBSSS--S--EEEEEEEEEExxbbvxaxaabpagaxbbbxxabbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a0j_A_641a0j   A     CACALCIUM ION R - 66
1hj8_A_641hj8   A     BAMBENZAMIDINE E - 64
1hj8_A_641hj8   A     BAMBENZAMIDINE R - 66
1hj9_A_641hj9   A     CACALCIUM ION V - 75
1rfn_A_651rfn   A     CACALCIUM ION G - 69
1rfn_A_651rfn   A     CACALCIUM ION E - 70
1rfn_A_651rfn   A     CACALCIUM ION H - 71
1rfn_A_651rfn   A     CACALCIUM ION N - 72
1rfn_A_651rfn   A     CACALCIUM ION I - 73
1rfn_A_651rfn   A     CACALCIUM ION E - 74
1rfn_A_651rfn   A     CACALCIUM ION E - 75
1rfn_A_651rfn   A     CACALCIUM ION T - 76
1rfn_A_651rfn   A     CACALCIUM ION E - 77
1rfn_A_651rfn   A     CACALCIUM ION H - 78
1rfn_A_651rfn   A     CACALCIUM ION E - 80

Clusters included in this Subclass
CLUSTER: HA.11.3