ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 23.1.1

Subclass Accession number: 8061
Subclass: 23.1.1

Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 6.3 (>50 %) 6.3.5 (>50 %) 6.3.5.8
SCOP : 56321 (>75 %) 56322 (>75 %) 56323 (>75 %)

Number of loops: 3

Average sequence ID (%) : 47.5 +/- 23.1
Average RMSD (Å) : 0.500 +/- 0.173

Consensus geometry

d (Å): 5

delta (°): 90-135

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	hhXYDhhRXhEphXphXXXXXXhPphX
(φψ)-conformation:	bbpaaaaaaabpbpbapppabpbpabb

Pattern:	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x
Conservation:	1.672	-0.655	0.029	1.672	-0.382	-0.245	-0.245	2.219	1.672	-0.792	-1.066	1.124	-0.929	0.987	1.124	-0.382	0.029	-0.519	0.440	0.029	-0.655	-0.245	-0.655	-0.792	-1.203	-1.066	-0.108	2.219	-0.655	-0.655	-0.655	-0.519	-0.792

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1k0e_A_105	1k0e	A	105	137	GALGLFGYDLGRRFESLPEIAEQDIVLPDMAVG	EEEEEE-GGGGGGTS-----SB------SEEEE	exbexbxaaaaaaabxbxaapxxabxbxabbbx
1k0e_B_105	1k0e	B	105	137	GALGLFGYDLGRRFESLPEIAEQDIVLPDMAVG	EEEEEE-GGGGGGTS-----SB--S---SEEEE	exbebbxaaaaaaabxbxbapxxaxxbxabbbx
1qdl_A_81	1qdl	A	81	113	GMIGYISYDAVRFWEKIRDLKPAAEDWPYAEFF	EEEEEE-GGGGGGTS-----S-BSS---SEEEE	ebbebbxaaaaaaabxbpbaxwxabxbxabbbb

Clusters included in this Subclass