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Information on SUBCLASS 0.1.18
Subclass Accession number: 8080
Subclass: 0.1.18 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 6.7 +/- 12.1
Average RMSD (Å) : 0.617 +/- 0.172

Consensus geometry
d (Å): 3 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: phXp
(φψ)-conformation: aab_
Pattern: [AGLY][adnrs][denry][ily]x[EFKQY]
Conservation:-0.138-0.431-1.0061.231-0.8791.223
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bxo_A_2691bxo   A269274GSLINYHHHHEEaaaaxa
1ffr_A_501ffr   A5055YNNLVKHHHHEEaaaabb
1g3m_A_41g3m   A712YYEKFEHHHHEEaaaabb
1g6s_A_4161g6s   A420425LARISQHHHHEEaaaaxb
1n62_C_1491n62   C149154ARDYYQHHHHEEaaaaba
1oew_A_2741oew   A274279GDYIDFHHHHEEaaaaxa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bxo_A_2691bxo   A     PP7METHYL CYCLO[(2S)-2-[[(1R)-1-(N-(L-N-(3-METHYLBUTANOYL)VALYL-L-ASPARTYL)AMINO)-3-METHYLBUTYL] HYDROXYPHOSPHINYLOXY]-3-(3-AMINOMETHYL)PHENYLPROPANOATE Y - 274
1g3m_A_41g3m   A     EDO1,2-ETHANEDIOL Y - 7
1g3m_A_41g3m   A     EDO1,2-ETHANEDIOL Y - 8
1g3m_A_41g3m   A     EDO1,2-ETHANEDIOL F - 11
1g3m_A_41g3m   A     EDO1,2-ETHANEDIOL E - 12
1g3m_A_41g3m   A     EDO1,2-ETHANEDIOL E - 13
1n62_C_1491n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 152
1oew_A_2741oew   A     GOLGLYCEROL D - 278
1oew_A_2741oew   A     GOLGLYCEROL F - 279
1oew_A_2741oew   A     GOLGLYCEROL G - 280
1oew_A_2741oew   A     GOLGLYCEROL P - 281
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oew_A_2741oew   A AC3GOL BINDING SITE FOR CHAIN AD - 278
1oew_A_2741oew   A AC3GOL BINDING SITE FOR CHAIN AG - 280
1oew_A_2741oew   A AC3GOL BINDING SITE FOR CHAIN AP - 281

Clusters included in this Subclass
CLUSTER: HE.0.12