Information on SUBCLASS 0.1.28 |
Subclass Accession number: 8090
Subclass: 0.1.28 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 22.2 +/- 38.4 Average RMSD (Å) : 0.525 +/- 0.250 Consensus geometry
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Consensus Sequence: | XhXX |
(φψ)-conformation: | aabb |
Pattern: | x | x | x | x | x | x | x | x | x |
Conservation: | 1.542 | -0.487 | -0.373 | -0.487 | -0.373 | -0.031 | 1.869 | -0.830 | -0.830 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c7s_A_391 | 1c7s | A | 391 | 399 | ELTEVGGQR | HHHHTTTEE | aaaaaaabb |
1d7k_B_277 | 1d7k | B | 277 | 285 | RYYVASAFT | HHHHTTTEE | aaaaaaabb |
1f3t_A_277 | 1f3t | A | 277 | 285 | RYYVASAFT | HHHHGGGEE | aaaaaaabb |
1hkv_A_303 | 1hkv | A | 303 | 311 | RAIAGPGTI | HHHHSTTEE | aaaaaaabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d7k_B_277 | 1d7k | B | LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) | R - 277 |
1d7k_B_277 | 1d7k | B | LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) | Y - 278 |
1f3t_A_277 | 1f3t | A | PLPPYRIDOXAL-5'-PHOSPHATE | R - 277 |
1f3t_A_277 | 1f3t | A | PUT1,4-DIAMINOBUTANE | R - 277 |
1f3t_A_277 | 1f3t | A | PLPPYRIDOXAL-5'-PHOSPHATE | Y - 278 |
1hkv_A_303 | 1hkv | A | PLPPYRIDOXAL-5'-PHOSPHATE | R - 303 |
1hkv_A_303 | 1hkv | A | LYSLYSINE | R - 303 |
1hkv_A_303 | 1hkv | A | PLPPYRIDOXAL-5'-PHOSPHATE | A - 304 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1hkv_A_303 | 1hkv | A | PLAPLP BINDING SITE FOR CHAIN A | R - 303 |
Clusters included in this Subclass |
CLUSTER: HE.3.169 |