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Information on SUBCLASS 0.1.34
Subclass Accession number: 8096
Subclass: 0.1.34 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 6.7 +/- 10.3
Average RMSD (Å) : 0.825 +/- 0.150

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXXX
(φψ)-conformation: aapa
Pattern: xx[EKL]x[FTVY]xxx[ILTV]x
Conservation:0.0730.1240.3031.9800.319-0.996-0.871-0.9131.059-1.078
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8d_*_141a8d   -1827LKKSTILNLDHHHTEEEEEEaaaaxabbxb
1cs8_A_1411cs8   A142151SFLFYKEGIYHHHTEEEEEEaaaapabexx
1gpe_A_4841gpe   A484493MKEYFAGETLHHHHEEEEEEaaaaxaexab
2cb5_A_4122cb5   A415424FSEYVYEVVVHHHHEEEEEEaaaaxabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE F - 488
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE A - 489
1gpe_A_4841gpe   A     NAGN-ACETYL-D-GLUCOSAMINE G - 490
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE G - 490
1gpe_A_4841gpe   A     NAGN-ACETYL-D-GLUCOSAMINE E - 491
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE E - 491
1gpe_A_4841gpe   A     NAGN-ACETYL-D-GLUCOSAMINE T - 492
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE T - 492
1gpe_A_4841gpe   A     NAGN-ACETYL-D-GLUCOSAMINE L - 493

Clusters included in this Subclass
CLUSTER: HE.1.44