Logo
Information on SUBCLASS 0.1.40
Subclass Accession number: 8102
Subclass: 0.1.40 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 10.4 +/- 10.8
Average RMSD (Å) : 0.533 +/- 0.153

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: pphX
(φψ)-conformation: aabb
Pattern: [CNT]x[ILT][KLM][DK][ALV][FLV][ARS]x[ENY][PR][DE][HRS][FI]x[FVY]
Conservation:-0.567-0.608-0.440-0.5671.035-0.567-0.312-0.695-0.695-0.8221.0142.615-0.4401.418-0.6950.325
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ex7_A_141ex7   A1631TLLKKLFAEYPDSFGFHHHHHHHHH-TTTEEEaaaaaaaaaaaaabbx
1jvs_A_111jvs   A1429CSTLDVVRHNPEHFRVHHHHHHHHH-TTTEEEaaaaaaaaaaaaabbx
1pox_A_381pox   A3853NSIMDALSAERDRIHYHHHHHHHHHTTTTSEEaaaaaaaaaaaaabbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ex7_A_141ex7   A     5GPGUANOSINE-5'-MONOPHOSPHATE K - 14
1jvs_A_111jvs   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 11
1jvs_A_111jvs   A     MSESELENOMETHIONINE I - 12
1jvs_A_111jvs   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 12
1jvs_A_111jvs   A     MSESELENOMETHIONINE G - 13
1jvs_A_111jvs   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 13
1jvs_A_111jvs   A     MSESELENOMETHIONINE S - 15
1jvs_A_111jvs   A     MSESELENOMETHIONINE T - 16
1jvs_A_111jvs   A     MSESELENOMETHIONINE V - 19
1jvs_A_111jvs   A     MSESELENOMETHIONINE V - 20
1jvs_A_111jvs   A     MSESELENOMETHIONINE F - 27
1jvs_A_111jvs   A     MSESELENOMETHIONINE A - 31
1jvs_A_111jvs   A     MSESELENOMETHIONINE L - 32
1jvs_A_111jvs   A     MSESELENOMETHIONINE V - 33
1jvs_A_111jvs   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 33

Clusters included in this Subclass
CLUSTER: HE.5.50