Information on SUBCLASS 0.1.40 |
Subclass Accession number: 8102
Subclass: 0.1.40 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 10.4 +/- 10.8 Average RMSD (Å) : 0.533 +/- 0.153 Consensus geometry
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Consensus Sequence: | pphX |
(φψ)-conformation: | aabb |
Pattern: | [CNT] | x | [ILT] | [KLM] | [DK] | [ALV] | [FLV] | [ARS] | x | [ENY] | [PR] | [DE] | [HRS] | [FI] | x | [FVY] |
Conservation: | -0.567 | -0.608 | -0.440 | -0.567 | 1.035 | -0.567 | -0.312 | -0.695 | -0.695 | -0.822 | 1.014 | 2.615 | -0.440 | 1.418 | -0.695 | 0.325 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ex7_A_14 | 1ex7 | A | 16 | 31 | TLLKKLFAEYPDSFGF | HHHHHHHHH-TTTEEE | aaaaaaaaaaaaabbx |
1jvs_A_11 | 1jvs | A | 14 | 29 | CSTLDVVRHNPEHFRV | HHHHHHHHH-TTTEEE | aaaaaaaaaaaaabbx |
1pox_A_38 | 1pox | A | 38 | 53 | NSIMDALSAERDRIHY | HHHHHHHHHTTTTSEE | aaaaaaaaaaaaabbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ex7_A_14 | 1ex7 | A | 5GPGUANOSINE-5'-MONOPHOSPHATE | K - 14 |
1jvs_A_11 | 1jvs | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | S - 11 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | I - 12 |
1jvs_A_11 | 1jvs | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | I - 12 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | G - 13 |
1jvs_A_11 | 1jvs | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | G - 13 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | S - 15 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | T - 16 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | V - 19 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | V - 20 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | F - 27 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | A - 31 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | L - 32 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | V - 33 |
1jvs_A_11 | 1jvs | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | V - 33 |
Clusters included in this Subclass |
CLUSTER: HE.5.50 |