Information on SUBCLASS 0.1.45 |
Subclass Accession number: 8107
Subclass: 0.1.45 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 15.4 +/- 22.4 Average RMSD (Å) : 0.233 +/- 0.058 Consensus geometry
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Consensus Sequence: | XpXX |
(φψ)-conformation: | aabb |
Pattern: | [DPQ] | [GIV] | [IL] | x | [AKM] | [HS] | [QR] | x | [HN] | x | x | [FLV] | [AGV] |
Conservation: | -0.272 | -1.012 | 0.978 | -1.012 | -0.827 | 1.089 | 1.107 | -0.735 | 1.706 | -0.860 | 0.936 | -0.272 | -0.827 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gkl_A_938 | 1gkl | A | 939 | 951 | QGIAASRMHRGFG | HHHHTTGGGEEEE | aaaaaaaaabbbb |
1kqn_A_201 | 1kqn | A | 201 | 213 | DVLWKHRSNIHVV | HHHHHTGGGEEEE | aaaaaaaaabbxb |
1nup_A_180 | 1nup | A | 180 | 192 | PILRMHQHNIHLA | HHHHHTGGGEEEE | aaaaaaaaabbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gkl_A_938 | 1gkl | A | CDCADMIUM ION | A - 943 |
1gkl_A_938 | 1gkl | A | CDCADMIUM ION | S - 944 |
1gkl_A_938 | 1gkl | A | CDCADMIUM ION | M - 946 |
1gkl_A_938 | 1gkl | A | CDCADMIUM ION | H - 947 |
1gkl_A_938 | 1gkl | A | GOLGLYCEROL | F - 953 |
1kqn_A_201 | 1kqn | A | XEXENON | L - 203 |
Clusters included in this Subclass |
CLUSTER: HE.4.271 |