Information on SUBCLASS 0.1.56 |
Subclass Accession number: 8118
Subclass: 0.1.56 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 26.3 +/- 17.1 Average RMSD (Å) : 0.400 +/- 0.100 Consensus geometry
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Consensus Sequence: | cXLX |
(φψ)-conformation: | aapp |
Pattern: | x | [NQT] | x | x | x | [HR] | [AIL] | x | [DKT] | [DK] | [HKW] | [L] | [AK] | [EP] | [DG] | [G] | x | [IL] | [FIT] |
Conservation: | -0.599 | -0.357 | -1.131 | -0.667 | -0.599 | 1.290 | -0.512 | -1.209 | -0.667 | 0.205 | -0.512 | 1.346 | 0.045 | 0.654 | 0.510 | 2.740 | -0.492 | 0.698 | -0.744 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dhr_*_96 | 1dhr | - | 111 | 129 | STISSHLATKHLKEGGLLT | HHHHHHHHHHHEEEEEEEE | aaaaaaaaaaaxxxvxbbb |
1l3i_A_113 | 1l3i | A | 113 | 131 | LQEILRIIKDKLKPGGRII | HHHHHHHHHHTEEEEEEEE | aaaaaaaaaaaxxpvxbbb |
1or8_A_156 | 1or8 | A | 156 | 174 | LNTVLHARDKWLAPDGLIF | HHHHHHHHHHHEEEEEEEE | aaaaaaaaaaaxxxvxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dhr_*_96 | 1dhr | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | L - 102 |
1dhr_*_96 | 1dhr | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | K - 105 |
1dhr_*_96 | 1dhr | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | Q - 106 |
1dhr_*_96 | 1dhr | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | S - 107 |
1dhr_*_96 | 1dhr | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | W - 109 |
1dhr_*_96 | 1dhr | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | T - 110 |
1dhr_*_96 | 1dhr | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | A - 131 |
1l3i_A_113 | 1l3i | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | I - 116 |
1l3i_A_113 | 1l3i | A | MSESELENOMETHIONINE | I - 131 |
1or8_A_156 | 1or8 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | T - 158 |
Clusters included in this Subclass |
CLUSTER: HE.0.21 |