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Information on SUBCLASS 0.1.56
Subclass Accession number: 8118
Subclass: 0.1.56 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 26.3 +/- 17.1
Average RMSD (Å) : 0.400 +/- 0.100

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: cXLX
(φψ)-conformation: aapp
Pattern: x[NQT]xxx[HR][AIL]x[DKT][DK][HKW][L][AK][EP][DG][G]x[IL][FIT]
Conservation:-0.599-0.357-1.131-0.667-0.5991.290-0.512-1.209-0.6670.205-0.5121.3460.0450.6540.5102.740-0.4920.698-0.744
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dhr_*_961dhr   -111129STISSHLATKHLKEGGLLTHHHHHHHHHHHEEEEEEEEaaaaaaaaaaaxxxvxbbb
1l3i_A_1131l3i   A113131LQEILRIIKDKLKPGGRIIHHHHHHHHHHTEEEEEEEEaaaaaaaaaaaxxpvxbbb
1or8_A_1561or8   A156174LNTVLHARDKWLAPDGLIFHHHHHHHHHHHEEEEEEEEaaaaaaaaaaaxxxvxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dhr_*_961dhr   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 102
1dhr_*_961dhr   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 105
1dhr_*_961dhr   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Q - 106
1dhr_*_961dhr   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 107
1dhr_*_961dhr   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE W - 109
1dhr_*_961dhr   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 110
1dhr_*_961dhr   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 131
1l3i_A_1131l3i   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 116
1l3i_A_1131l3i   A     MSESELENOMETHIONINE I - 131
1or8_A_1561or8   A     SAHS-ADENOSYL-L-HOMOCYSTEINE T - 158

Clusters included in this Subclass
CLUSTER: HE.0.21