Logo
Information on SUBCLASS 1.1.4
Subclass Accession number: 8132
Subclass: 1.1.4 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 15

Average sequence ID (%) : 34.0 +/- 24.4
Average RMSD (Å) : 0.480 +/- 0.204

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXGhp
(φψ)-conformation: aagbb
Pattern: [KT][afgvw][AGRS][cilmv]x[agnqst][flm][cstv][eknqr][acdgnpst][ailmt][AGQ]x[adenr][LMVWY][AGIL][KPRST]x[GKNR][ILV][hnrt][ILV][nsv][agnstv][FILVY]x
Conservation:2.158-1.0860.308-0.102-1.347-0.917-0.0600.0050.121-1.200-0.1790.910-1.241-0.2750.124-0.1830.138-1.4420.9461.897-0.1311.8900.531-0.6840.767-0.950
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ae1_A_1691ae1   A175200KGAINQMTKSLACEWAKDNIRVNSVAHHHHHHHHHHHHHHHGGGTEEEEEEEaaaaaaaaaaaaaaaaaalbbbbbbb
1cyd_A_1471cyd   A153178KGAMTMLTKAMAMELGPHKIRVNSVNHHHHHHHHHHHHHHHGGGTEEEEEEEaaaaaaaaaaaaaaaaaavbxbbbbb
1e6w_A_1661e6w   A172197KGGIVGMTLPIARDLAPIGIRVVTIAHHHHHHHHHHHHHHHGGGTEEEEEEEaaaaaaaaaaaaaaaaaavbxbbbbb
1gee_A_1561gee   A162187KGGMKLMTETLALEYAPKGIRVNNIGHHHHHHHHHHHHHHHGGGT-EEEEEEaaaaaaaaaaaaaaaaaavxxbbbbb
1geg_A_1501geg   A156181KFAVRGLTQTAARDLAPLGITVNGYCHHHHHHHHHHHHHHHGGGTEEEEEEEaaaaaaaaaaaaaaaaaavbbbbbbb
1gp1_A_481gp1   A4873TVRDYTQMNDLQRRLGPRGLVVLGFPHHHHHHHHHHHHHHHGGGTEEEEEEEaaaaaaaaaaaaaaaaaagxbxbbbx
1h5q_A_1671h5q   A173198KAACSNLVKGLAAEWASAGIRVNALSHHHHHHHHHHHHHHHGGGTEEEEEEEaaaaaaaaaaaaaaaaaalbbbbbbb
1hdc_A_1501hdc   A156181KWGVRGLSKLAAVELGTDRIRVNSVHHHHHHHHHHHHHHHHGGGTEEEEEEEaaaaaaaaaaaaaaaaaNvxbbbxbb
1i01_A_1531i01   A155180KAGLIGFSKSLAREVASRGITVNVVAHHHHHHHHHHHHHHHGGGTEEEEEEEaaaaaaaaaaaaaaaaaavbbbbbbb
1iy8_A_1631iy8   A169194KHGVVGLTRNSAVEYGRYGIRINAIAHHHHHHHHHHHHHHHGGGT-EEEEEEaaaaaaaaaaaaaaaaaavxbbbbbb
1jtv_A_1531jtv   A159184KFALEGLCESLAVLLLPFGVHLSLIEHHHHHHHHHHHHHHHGGGTEEEEEEEaaaaaaaaaaaaaaaaaavbbbbxbx
1k2w_A_1501k2w   A156181KAAVISLTQSAGLNLIRHGINVNAIAHHHHHHHHHHHHHHHGGGTEEEEEEEaaaaaaaaaaaaaaaaaavbxbbbbb
1nff_A_1511nff   A157182KFAVRGLTKSTALELGPSGIRVNSIHHHHHHHHHHHHHHHHGGGTEEEEEEEaaaaaaaaaaaaaaaaaavbbbbbbb
1qsg_A_1581qsg   A163188KASLEANVRYMANAMGPEGVRVNAISHHHHHHHHHHHHHHHTTTTEEEEEEEaaaaaaaaaaaaaaaaaagbbbbbbx
2ae2_A_1572ae2   A163188KGAMDQLTRCLAFEWAKDNIRVNGVGHHHHHHHHHHHHHHTGGGTEEEEEEEaaaaaaaaaaaaaaaaaavbxbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ae1_A_1691ae1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 171
1ae1_A_1691ae1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 175
1ae1_A_1691ae1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 200
1ae1_A_1691ae1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE P - 201
1cyd_A_1471cyd   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 149
1cyd_A_1471cyd   A     IPAISOPROPYL ALCOHOL Y - 149
1cyd_A_1471cyd   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 153
1cyd_A_1471cyd   A     IPAISOPROPYL ALCOHOL K - 153
1cyd_A_1471cyd   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 177
1cyd_A_1471cyd   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 178
1cyd_A_1471cyd   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE P - 179
1cyd_A_1471cyd   A     IPAISOPROPYL ALCOHOL P - 179
1e6w_A_1661e6w   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 168
1e6w_A_1661e6w   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 172
1e6w_A_1661e6w   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 197
1e6w_A_1661e6w   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE P - 198
1gee_A_1561gee   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 158
1gee_A_1561gee   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 162
1gee_A_1561gee   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 187
1gee_A_1561gee   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE P - 188
1geg_A_1501geg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 152
1geg_A_1501geg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 156
1geg_A_1501geg   A     MGMAGNESIUM ION D - 169
1geg_A_1501geg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 180
1geg_A_1501geg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE C - 181
1geg_A_1501geg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE P - 182
1gp1_A_481gp1   A     SEC2-AMINO-3-SELENINO-PROPIONIC ACID T - 48
1gp1_A_481gp1   A     SEC2-AMINO-3-SELENINO-PROPIONIC ACID V - 49
1gp1_A_481gp1   A     SEC2-AMINO-3-SELENINO-PROPIONIC ACID D - 51
1h5q_A_1671h5q   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 169
1h5q_A_1671h5q   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 173
1h5q_A_1671h5q   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 198
1h5q_A_1671h5q   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE P - 199
1hdc_A_1501hdc   A     CBOCARBENOXOLONE Y - 152
1hdc_A_1501hdc   A     CBOCARBENOXOLONE K - 156
1hdc_A_1501hdc   A     CBOCARBENOXOLONE P - 182
1iy8_A_1631iy8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 165
1iy8_A_1631iy8   A     MPD2-METHYL-2,4-PENTANEDIOL Y - 165
1iy8_A_1631iy8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 169
1iy8_A_1631iy8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE P - 195
1iy8_A_1631iy8   A     MPD2-METHYL-2,4-PENTANEDIOL P - 195
1jtv_A_1531jtv   A     TESTESTOSTERONE C - 185
1nff_A_1511nff   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 153
1nff_A_1511nff   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 157
1nff_A_1511nff   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 182
1nff_A_1511nff   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE P - 183
1qsg_A_1581qsg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE M - 159
1qsg_A_1581qsg   A     TCLTRICLOSAN M - 159
1qsg_A_1581qsg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 163
1qsg_A_1581qsg   A     TCLTRICLOSAN K - 163
1qsg_A_1581qsg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 187
1qsg_A_1581qsg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 188
1qsg_A_1581qsg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 189
2ae2_A_1572ae2   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 159
2ae2_A_1572ae2   A     PTOPSEUDOTROPINE Y - 159
2ae2_A_1572ae2   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 163
2ae2_A_1572ae2   A     PTOPSEUDOTROPINE K - 163
2ae2_A_1572ae2   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 188
2ae2_A_1572ae2   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE P - 189
2ae2_A_1572ae2   A     PTOPSEUDOTROPINE P - 189
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e6w_A_1661e6w   A ASACATALYTIC TRIAD CHAIN AY - 168
1e6w_A_1661e6w   A ASACATALYTIC TRIAD CHAIN AK - 172
1h5q_A_1671h5q   A AC1NAP BINDING SITE FOR CHAIN AK - 173

Clusters included in this Subclass
CLUSTER: HE.4.57
CLUSTER: HE.5.18