Information on SUBCLASS 1.1.7 |
Subclass Accession number: 8135
Subclass: 1.1.7 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 16.7 +/- 20.4 Average RMSD (Å) : 0.725 +/- 0.050 Consensus geometry
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Consensus Sequence: | XXchc |
(φψ)-conformation: | aagbb |
Pattern: | x | [GKN] | x | x | [ADT] | x | [AFGV] | [EKSY] | [AK] | x | [GN] | [AGIL] | [DKQ] | [AIVY] | x | x | [AG] | [GNR] | x | [FIV] | x |
Conservation: | -0.850 | 0.428 | -0.398 | 0.085 | -0.190 | -0.381 | -1.165 | -0.531 | 1.002 | -0.461 | 2.706 | -1.165 | 0.878 | -0.249 | -0.576 | -0.765 | 1.568 | 0.726 | -1.024 | 1.007 | -0.645 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i7q_B_86 | 1i7q | B | 86 | 106 | LGHQAIVEAYGGQVGQAGEIL | HHHHHHHHHTT-EEEEEEEEE | aaaaaaaaaagxbbbpxabbb |
1je0_A_132 | 1je0 | A | 136 | 156 | NKLVTSFSKRNLKYYVGNVFS | HHHHHHHHHTT--EEEEEEEE | aaaaaaaaaalbxbbbexbxx |
1pk9_A_131 | 1pk9 | A | 135 | 155 | RNAVDAAKALGIDARVGNLFS | HHHHHHHHHTT--EEEEEEEE | aaaaaaaaaavbxbxbbxbbx |
1qdl_B_85 | 1qdl | B | 85 | 105 | LGHQAIGYAFGAKIRRARKVF | HHHHHHHHHTT-EEEEEEEEE | aaaaaaaaaavxbbbxxabxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i7q_B_86 | 1i7q | B | ILGGLUTAMYL GROUP | L - 86 |
1i7q_B_86 | 1i7q | B | ILGGLUTAMYL GROUP | G - 87 |
1i7q_B_86 | 1i7q | B | ILGGLUTAMYL GROUP | Q - 89 |
1i7q_B_86 | 1i7q | B | ILGGLUTAMYL GROUP | H - 107 |
Clusters included in this Subclass |
CLUSTER: HE.3.130 |