Information on SUBCLASS 1.2.4 |
Subclass Accession number: 8140
Subclass: 1.2.4 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 48 Average sequence ID (%) : 12.0 +/- 15.3 Average RMSD (Å) : 0.533 +/- 0.159 Consensus geometry
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Consensus Sequence: | pXXXX |
(φψ)-conformation: | aalbb |
Pattern: | x | x | [adeknqrst] | x | [degknqrs] | [afgikltv] | x | x |
Conservation: | -0.493 | -0.276 | 0.101 | -0.471 | 2.168 | -0.184 | -0.845 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1alq_*_33 | 1alq | - | 37 | 44 | EKKYNAHI | HHHHT-EE | aaaalbbb |
1brw_A_136 | 1brw | A | 143 | 150 | VNENGIAI | HHHHSEEE | aaaavbbb |
1bsg_*_28 | 1bsg | - | 37 | 44 | ERASGARL | HHHHTSEE | aaaavbxb |
1bu6_O_416 | 1bu6 | O | 423 | 430 | SDILGTRV | HHHHTSEE | aaaavbxb |
1bue_A_30 | 1bue | A | 37 | 44 | ETDFNGRI | HHHHTSEE | aaaavbbb |
1bw0_A_361 | 1bw0 | A | 369 | 375 | LEEENVQ. | HHHH-EE. | aaaalbb. |
1e5m_A_349 | 1e5m | A | 360 | 366 | AIAEDKV. | HHHHTEE. | aaaalbb. |
1ejd_A_97 | 1ejd | A | 101 | 108 | VARFGQGQ | HHHHSEEE | aaaavbbb |
1fvr_A_1007 | 1fvr | A | 1009 | 1015 | SLNYSVY. | HHHH-EE. | aaaalbb. |
1g8t_A_79 | 1g8t | A | 80 | 87 | NAALKVDR | HHHH-EEE | aaaalbbx |
1gpj_A_201 | 1gpj | A | 208 | 215 | ARDLGGEA | HHHHT-EE | aaaavbbx |
1gyn_A_80 | 1gyn | A | 97 | 104 | AEHYGVPV | HHHHT-EE | aaaavbwb |
1h0c_A_332 | 1h0c | A | 340 | 346 | IDHFDIE. | HHHH-EE. | aaaavbx. |
1h7b_A_416 | 1h7b | A | 431 | 438 | TERTGFAF | HHHH--EE | aaaavxxx |
1hzo_A_28 | 1hzo | A | 37 | 44 | EKYSQGRL | HHHHTSEE | aaaavbbb |
1i2s_A_32 | 1i2s | A | 37 | 44 | EEQFDAKL | HHHHT-EE | aaaalbbb |
1iw7_C_883 | 1iw7 | C | 894 | 901 | GYFLGQRY | HHHHTEEE | aaaalbbb |
1iys_A_29 | 1iys | A | 37 | 44 | EKSSGGRL | HHHHTSEE | aaaavbbb |
1j11_A_313 | 1j11 | A | 320 | 327 | FKSAKLDV | HHHHT-EE | aaaavbxb |
1j36_A_465 | 1j36 | A | 474 | 480 | DEYSGIE. | HHHH-EE. | aaaavbb. |
1jln_A_485 | 1jln | A | 500 | 506 | LKEEGVV. | HHHHSEE. | aaaavbb. |
1jq5_A_96 | 1jq5 | A | 106 | 113 | ADELDAYI | HHHHT-EE | aaaalxxb |
1k8t_A_309 | 1k8t | A | 319 | 326 | ARELNTYI | HHHHTEEE | aaaalbxb |
1kas_*_345 | 1kas | - | 356 | 362 | ALRDQAV. | HHHHTEE. | aaaalbb. |
1kl7_A_307 | 1kl7 | A | 311 | 318 | FLKSGLYE | HHHHSEEE | aaaavbxb |
1kor_A_11 | 1kor | A | 21 | 28 | KETYRAEV | HHHHT-EE | aaaalbxb |
1l3s_A_744 | 1l3s | A | 757 | 764 | AKQKGYVT | HHHHSEEE | aaaavbbb |
1lo7_A_47 | 1lo7 | A | 51 | 58 | VVERGIVG | HHHH-EEE | aaaavxae |
1luc_A_124 | 1luc | A | 138 | 145 | GFNEGYIA | HHHHSEEE | aaaavbbb |
1luc_B_124 | 1luc | B | 138 | 144 | AFTTGYC. | HHHHSEE. | aaaavbb. |
1me8_A_331 | 1me8 | A | 346 | 352 | FEETGIY. | HHHHSEE. | aaaavbb. |
1mfo_A_28 | 1mfo | A | 37 | 44 | ERRDNVLI | HHHHTEEE | aaaalbbb |
1nns_A_286 | 1nns | A | 286 | 293 | DAKYGFVA | HHHHTEEE | aaaavxbx |
1o17_A_133 | 1o17 | A | 140 | 147 | VNKTNFVF | HHHHSEEE | aaaavbbb |
1obd_A_127 | 1obd | A | 133 | 139 | YVKTGTV. | HHHHSEE. | aaaavbb. |
1olt_A_365 | 1olt | A | 377 | 384 | LICNFRLD | HHHHSEEE | aaaalbbx |
1pfk_A_139 | 1pfk | A | 157 | 164 | SSSHQRIS | HHHHT-EE | aaaalbbb |
1prx_A_157 | 1prx | A | 170 | 176 | TAEKRVA. | HHHH-EE. | aaaalbb. |
1qo2_A_177 | 1qo2 | A | 184 | 191 | AIEAEVKV | HHHHT-EE | aaaalbxb |
1qw9_A_109 | 1qw9 | A | 116 | 123 | AKMVGAEV | HHHHT-EE | aaaavbxb |
1r31_A_187 | 1r31 | A | 202 | 209 | EAITGGQV | HHHH-SEE | aaaavbbx |
1wsa_A_290 | 1wsa | A | 290 | 297 | DKKLGFVA | HHHHTEEE | aaaavbbb |
1yfo_A_438 | 1yfo | A | 453 | 459 | MHSERKV. | HHHSSEE. | aaaalbb. |
2aaa_*_216 | 2aaa | - | 220 | 227 | NKASGVYC | HHHHTSEE | aaaavbpb |
2kfn_A_796 | 2kfn | A | 809 | 816 | AKEQGYVE | HHHHSEEE | aaaavbbb |
2sfa_*_179 | 2sfa | - | 183 | 190 | LSAYGVSI | HHHHTEEE | aaaavbbx |
2sga_*_231 | 2sga | - | 235 | 242 | LSAYGATV | HHHHTEEE | aaaavbbx |
2tpt_*_139 | 2tpt | - | 146 | 153 | IKDVGVAI | HHHTSEEE | aaaavbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h0c_A_332 | 1h0c | A | AC3GOL BINDING SITE FOR CHAIN A | R - 333 |
1h0c_A_332 | 1h0c | A | AC3GOL BINDING SITE FOR CHAIN A | S - 337 |
1h0c_A_332 | 1h0c | A | AC4GOL BINDING SITE FOR CHAIN A | F - 343 |
1obd_A_127 | 1obd | A | AC3SO4 BINDING SITE FOR CHAIN A | G - 127 |
1obd_A_127 | 1obd | A | AC3SO4 BINDING SITE FOR CHAIN A | S - 128 |
Clusters included in this Subclass |
CLUSTER: HE.0.2 |
CLUSTER: HE.1.3 |
CLUSTER: HE.2.21 |