Information on SUBCLASS 1.2.8 |
Subclass Accession number: 8144
Subclass: 1.2.8 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 13 Average sequence ID (%) : 13.2 +/- 14.4 Average RMSD (Å) : 0.523 +/- 0.117 Consensus geometry
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Consensus Sequence: | XXchp |
(φψ)-conformation: | aalbb |
Pattern: | x | x | x | [AFGLMY] | [AEKQRS] | [akqrst] | x | [EGKNR] | [afilw] | [dhknqtw] | [cgipvy] |
Conservation: | -0.473 | -0.162 | -0.492 | -0.381 | 1.710 | 0.065 | -1.140 | 2.082 | 0.011 | -0.773 | -0.449 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b6r_A_11 | 1b6r | A | 17 | 27 | RQAGEPLGIAV | HHHHGGGTEEE | aaaaaaavbxb |
1bud_A_26 | 1bud | A | 41 | 51 | TESYSYLKIDI | HHHHHTTTEEE | aaaaaaavbxx |
1cjw_A_165 | 1cjw | A | 165 | 175 | VPFYQRFGFHP | HHHHHTTTEEE | aaaaaaavxbw |
1dhr_*_17 | 1dhr | - | 23 | 33 | VQAFRARNWWV | HHHHHTTT-EE | aaaaaaavxxb |
1ejd_A_402 | 1ejd | A | 403 | 413 | EDKLRALGANI | HHHHHTTT-EE | aaaaaaagxbb |
1gz6_B_162 | 1gz6 | B | 179 | 189 | VIEGRKNNIHC | HHHHGGGTEEE | aaaaaaalbbb |
1nhp_*_191 | 1nhp | - | 198 | 208 | TEEMEANNITI | HHHHHTTTEEE | aaaaaaalbxb |
1nsa_*_61 | 1nsa | - | 65 | 75 | EDFLEQNELQY | HHHHHTTT-EE | aaaaaaavxxb |
1nvt_A_237 | 1nvt | A | 239 | 249 | LKEAKKVNAKT | HHHHHTTT-EE | aaaaaaalxxx |
1ozh_A_501 | 1ozh | A | 502 | 512 | KAYAESFGAKG | HHHHHTTTSEE | aaaaaaavxxb |
1pjs_A_83 | 1pjs | A | 90 | 100 | SDAAESRRIFC | HHHHHTTT-EE | aaaaaaalbpb |
1ps9_A_383 | 1ps9 | A | 389 | 399 | AINAAARGHQV | HHHHHTTT-EE | aaaaaaagxxb |
1rkd_*_70 | 1rkd | - | 74 | 83 | RQQLATDNID. | HHHHHTTTEE. | aaaaaaavbx. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.3.45 |