Information on SUBCLASS 1.2.12 |
Subclass Accession number: 8148
Subclass: 1.2.12 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 15.6 +/- 20.9 Average RMSD (Å) : 0.443 +/- 0.181 Consensus geometry
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Consensus Sequence: | pXcXX |
(φψ)-conformation: | aalbb |
Pattern: | [afily] | [AEQR] | [aekqt] | x | [iklv] | [DNQR] | x | [FHILV] | [ailv] | [ADQR] | x | [gn] | x | x | [npv] |
Conservation: | -0.394 | 0.745 | -0.210 | -0.987 | -0.108 | 1.200 | -0.925 | 0.228 | 0.186 | 0.530 | -0.091 | 2.462 | -1.283 | -1.372 | 0.020 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1exp_*_215 | 1exp | - | 215 | 229 | FRQNLQRFADLGVDV | HHHHHHHHHTTT-EE | aaaaaaaaaaavbxb |
1frb_*_244 | 1frb | - | 245 | 259 | AQVLIRFHIQRNVVV | HHHHHHHHHTTT-EE | aaaaaaaaaaalbxb |
1hiz_A_245 | 1hiz | A | 248 | 262 | IEKTINMFAALGLDN | HHHHHHHHHTTT-EE | aaaaaaaaaaavxxb |
1od8_A_218 | 1od8 | A | 218 | 232 | FRTTLQNFAALGVDV | HHHHHHHHHTTT-EE | aaaaaaaaaaavbxb |
1pjr_*_169 | 1pjr | - | 177 | 190 | YQEYQQRLLRNHSL. | HHHHHHHHHHTTEE. | aaaaaaaaaaalbb. |
1scj_B_323 | 1scj | B | 323 | 337 | SAKKKDVISQKGGKV | HHHHHHHHHTTT-EE | aaaaaaaaaaagpbx |
2cev_A_68 | 2cev | A | 78 | 92 | LAAAVDQVVQRGRFP | HHHHHHHHHHTT-EE | aaaaaaaaaaavbxw |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1exp_*_215 | 1exp | * | GLCGLUCOSE | E - 233 |
1exp_*_215 | 1exp | * | G2F2-DEOXY-2FLUORO-GLUCOSE | E - 233 |
1frb_*_244 | 1frb | * | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | A - 245 |
1frb_*_244 | 1frb | * | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Q - 246 |
1hiz_A_245 | 1hiz | A | GLCGLUCOSE | E - 266 |
1od8_A_218 | 1od8 | A | IMDIMIDAZOLE | D - 231 |
1od8_A_218 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | E - 236 |
1od8_A_218 | 1od8 | A | XYPBETA-D-XYLOPYRANOSE | E - 236 |
1od8_A_218 | 1od8 | A | IMDIMIDAZOLE | E - 236 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1exp_*_215 | 1exp | * | NUCCATALYTIC NUCLEOPHILE, COVALENTLY LINKED TO THE FLUOROCELLOBIOSIDE. | E - 233 |
1hiz_A_245 | 1hiz | A | GL1GLC BINDING SITE FOR RESIDUE A1381 | E - 266 |
1od8_A_218 | 1od8 | A | AC9XDL BINDING SITE FOR CHAIN A | E - 236 |
Clusters included in this Subclass |
CLUSTER: HE.3.74 |