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Information on SUBCLASS 1.2.23
Subclass Accession number: 8159
Subclass: 1.2.23 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0000287 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 6.1 +/- 8.3
Average RMSD (Å) : 0.567 +/- 0.208

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: pXXXX
(φψ)-conformation: aalbb
Pattern: [DGK][IKL][AE]x[EK]xx[IKT]x[AIV][GLV]
Conservation:-0.031-0.2750.933-0.5192.399-0.642-0.397-0.642-0.7640.825-0.886
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1evl_A_5981evl   A598608DKEVESGKVAVHHHHHHTEEEEaaaaaavbbxx
1k8t_A_3091k8t   A317327KIARELNTYILHHHHHHTEEEEaaaaaalbxbb
1q5h_A_631q5h   A6474GLAAKHFIDVGHHHHHH-EEEEaaaaaavxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1q5h_A_631q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE S - 63
1q5h_A_631q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE G - 64
1q5h_A_631q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE L - 65
1q5h_A_631q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE V - 73
1q5h_A_631q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE G - 74

Clusters included in this Subclass
CLUSTER: HE.1.55