Information on SUBCLASS 2.2.9 |
Subclass Accession number: 8208
Subclass: 2.2.9 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 12 Average sequence ID (%) : 14.0 +/- 16.0 Average RMSD (Å) : 0.625 +/- 0.196 Consensus geometry
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Consensus Sequence: | XpXpXh |
(φψ)-conformation: | aapabb |
Pattern: | [FHILVY] | x | [dekns] | x | [AFILV] | [adeqrst] | [deknt] | [akst] | [dehk] | x | [aipv] | [fgilv] | x |
Conservation: | 0.600 | -1.291 | 0.493 | -1.134 | 1.394 | -0.837 | 0.752 | 0.376 | 1.067 | -1.142 | 0.771 | 0.342 | -1.392 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cf2_O_72 | 1cf2 | O | 72 | 84 | VDDMLDEADIVID | HHHHHHT-SEEEE | aaaaaaaxabbbx |
1e5d_A_294 | 1e5d | A | 297 | 309 | IMSEISDAGAVIV | HHHHHHT-SEEEE | aaaaaaaxabbbb |
1g63_A_67 | 1g63 | A | 67 | 79 | HINIVENHEYILV | HHHHHHT-SEEEE | aaaaaaababbbb |
1i1q_B_37 | 1i1q | B | 39 | 51 | LIDRLATMKNPVL | HHHHHTT-SSEEE | aaaaaaaxabwbb |
1iwe_A_46 | 1iwe | A | 50 | 62 | VDLLATDADIVSR | HHHHHTT-SEEEE | aaaaaaaxabbbb |
1j6u_A_359 | 1j6u | A | 360 | 372 | FAKALQLADEVVV | HHHHHTTSSEEEE | aaaaaaaxabbbb |
1kep_A_66 | 1kep | A | 69 | 81 | VDKLAAKADAIVH | HHHHHTT-SEEEE | aaaaaaababbbb |
1l7d_A_247 | 1l7d | A | 251 | 263 | VLKELVKTDIAIT | HHHHHTT-SEEEE | aaaaaaaxabbbb |
1moq_*_453 | 1moq | - | 457 | 469 | LAEDFSDKHHALF | HHHHHTT-SEEEE | aaaaaaaxabbbb |
1mv8_A_70 | 1mv8 | A | 70 | 82 | FKKAVLDSDVSFI | HHHHHHT-SEEEE | aaaaaaababbxx |
1php_*_297 | 1php | - | 303 | 315 | YRDVIRESKLVVW | HHHHHHT-SEEEE | aaaaaaababbbb |
1psd_A_44 | 1psd | A | 47 | 59 | LKESIRDAHFIGL | HHHHHTT-SEEEE | aaaaaaaxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cf2_O_72 | 1cf2 | O | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | V - 72 |
1cf2_O_72 | 1cf2 | O | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | D - 84 |
1g63_A_67 | 1g63 | A | FMNFLAVIN MONONUCLEOTIDE | H - 67 |
1g63_A_67 | 1g63 | A | FMNFLAVIN MONONUCLEOTIDE | A - 82 |
1iwe_A_46 | 1iwe | A | ACTACETATE ION | K - 46 |
1iwe_A_46 | 1iwe | A | IMPINOSINIC ACID | K - 46 |
1iwe_A_46 | 1iwe | A | ACTACETATE ION | G - 47 |
1kep_A_66 | 1kep | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | H - 81 |
1php_*_297 | 1php | * | ADPADENOSINE-5'-DIPHOSPHATE | N - 316 |
Clusters included in this Subclass |
CLUSTER: HE.4.47 |