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Information on SUBCLASS 2.2.9
Subclass Accession number: 8208
Subclass: 2.2.9 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 14.0 +/- 16.0
Average RMSD (Å) : 0.625 +/- 0.196

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XpXpXh
(φψ)-conformation: aapabb
Pattern: [FHILVY]x[dekns]x[AFILV][adeqrst][deknt][akst][dehk]x[aipv][fgilv]x
Conservation:0.600-1.2910.493-1.1341.394-0.8370.7520.3761.067-1.1420.7710.342-1.392
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cf2_O_721cf2   O7284VDDMLDEADIVIDHHHHHHT-SEEEEaaaaaaaxabbbx
1e5d_A_2941e5d   A297309IMSEISDAGAVIVHHHHHHT-SEEEEaaaaaaaxabbbb
1g63_A_671g63   A6779HINIVENHEYILVHHHHHHT-SEEEEaaaaaaababbbb
1i1q_B_371i1q   B3951LIDRLATMKNPVLHHHHHTT-SSEEEaaaaaaaxabwbb
1iwe_A_461iwe   A5062VDLLATDADIVSRHHHHHTT-SEEEEaaaaaaaxabbbb
1j6u_A_3591j6u   A360372FAKALQLADEVVVHHHHHTTSSEEEEaaaaaaaxabbbb
1kep_A_661kep   A6981VDKLAAKADAIVHHHHHHTT-SEEEEaaaaaaababbbb
1l7d_A_2471l7d   A251263VLKELVKTDIAITHHHHHTT-SEEEEaaaaaaaxabbbb
1moq_*_4531moq   -457469LAEDFSDKHHALFHHHHHTT-SEEEEaaaaaaaxabbbb
1mv8_A_701mv8   A7082FKKAVLDSDVSFIHHHHHHT-SEEEEaaaaaaababbxx
1php_*_2971php   -303315YRDVIRESKLVVWHHHHHHT-SEEEEaaaaaaababbbb
1psd_A_441psd   A4759LKESIRDAHFIGLHHHHHTT-SEEEEaaaaaaaxabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cf2_O_721cf2   O     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 72
1cf2_O_721cf2   O     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 84
1g63_A_671g63   A     FMNFLAVIN MONONUCLEOTIDE H - 67
1g63_A_671g63   A     FMNFLAVIN MONONUCLEOTIDE A - 82
1iwe_A_461iwe   A     ACTACETATE ION K - 46
1iwe_A_461iwe   A     IMPINOSINIC ACID K - 46
1iwe_A_461iwe   A     ACTACETATE ION G - 47
1kep_A_661kep   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 81
1php_*_2971php   *     ADPADENOSINE-5'-DIPHOSPHATE N - 316

Clusters included in this Subclass
CLUSTER: HE.4.47