Logo
Information on SUBCLASS 2.2.13
Subclass Accession number: 8212
Subclass: 2.2.13 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 8.9 +/- 11.4
Average RMSD (Å) : 0.787 +/- 0.210

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: pphpXh
(φψ)-conformation: aapabb
Pattern: xx[aily]x[egkst][kst][afgilv][deknpq]x[GILVY]x[FIKV]
Conservation:-0.740-0.9150.670-0.7400.1541.427-0.2860.388-1.1521.027-1.3191.485
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eua_A_81eua   A920ESILTTGPVVPVHHHHHS-SEEEEaaaaaababbxx
1f8y_A_1241f8y   A124135LMSWGVSDNVIKHHHHHH-SEEEEaaaaaaxabbbx
1jjf_A_2131jjf   A213224KAAREKLKLLFIHHHHHH-SEEEEaaaaaaxabbbb
1l9x_A_561l9x   A6071EILFKSINGILFHHHHHHSSEEEEaaaaaaxabbbb
1moq_*_2851moq   -286297DELLSKVEHIQIHHHHHH--EEEEaaaaaaxabbbb
1nyr_A_311nyr   A3142PGLRKKAVAGKFHHHHHH--EEEEaaaaaapabbbb
1pjr_*_2071pjr   -211222HYYQYKFQYIHIHHHHHH-SEEEEaaaaaaxabxbb
3pmg_A_1403pmg   A147158FQISKTIEEYAIHHHHHH--EEEEaaaaaapabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eua_A_81eua   A     PYRPYRUVIC ACID V - 20
1f8y_A_1241f8y   A     5MD5-METHYL-2'-DEOXYPSEUDOURIDINE L - 124
1f8y_A_1241f8y   A     5MD5-METHYL-2'-DEOXYPSEUDOURIDINE M - 125

Clusters included in this Subclass
CLUSTER: HE.2.52