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Information on SUBCLASS 8.1.1
Subclass Accession number: 822
Subclass: 8.1.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0000287 (>75 %)  GO:0005529 (>75 %)  GO:0030246 (>75 %)  
SCOP : 50352 (>75 %)  
 Number of loops: 9

Average sequence ID (%) : 14.3 +/- 14.2
Average RMSD (Å) : 0.911 +/- 0.348

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXhXXpXGpXhX
(φψ)-conformation: bpabapplppbb
Pattern: [ailt]xxx[AGRS]x[aenst]x[GRS]xx[aiklv]x[ILPV]
Conservation:0.292-0.329-0.655-0.8561.013-1.0760.222-0.6312.7260.229-0.725-0.148-0.7310.667
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bkz_A_321bkz   A3548NLLCGEEQGSDAALEEES-SSTT--EEEbbxabaxxvpxbab
1eys_H_891eys   H89102ATPFSPAPGSPLVPEEESSSSTT--EEEbbpabaxxvxxbxx
1io1_A_1411io1   A144157TIQVGANDGETIDIEEE-SSSTT-EEEExbxababpvxbbbb
1knm_A_581knm   A6073LDAAGTSNGSKVQIEEES-SSTT-BEEEpbxababpvxxbbb
1m2t_B_3101m2t   B312325LTTYGYTAGVYVMIEEES-SSTT-BEEExbxababpvxxbbx
1m2t_B_3531m2t   B355368LAASSGIKGTTLTVEE-SS-STT-B-EExbbabaxpvxxxbb
1m2t_B_4371m2t   B439452LTNGRDSISTVINIEE-SS-STT-B-EExbxabaxpvxxxbb
1rzh_H_871rzh   H87100LARTAVSEGFPHAPEEESSSSTTS-EEEbbpababxvbxbxx
1wba_*_1161wba   -120133IQKGSNTPRTYKLLEEE-SSSTT-EEEEbbpabaxpvbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1knm_A_581knm   A     LATLACTOSE G - 68
1m2t_B_3101m2t   B     GOLGLYCEROL T - 313
1m2t_B_3101m2t   B     GOLGLYCEROL T - 314
1m2t_B_3101m2t   B     GOLGLYCEROL Y - 315
1m2t_B_3101m2t   B     GOLGLYCEROL Y - 317
1m2t_B_3101m2t   B     GOLGLYCEROL M - 324
1m2t_B_3101m2t   B     GOLGLYCEROL F - 326
1m2t_B_4371m2t   B     GOLGLYCEROL S - 447

Clusters included in this Subclass
CLUSTER: HA.7.30
CLUSTER: HA.8.40
CLUSTER: HA.9.2