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Information on SUBCLASS 2.5.6
Subclass Accession number: 8253
Subclass: 2.5.6 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 14.8 +/- 32.0
Average RMSD (Å) : 0.750 +/- 0.300

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XpXXXX
(φψ)-conformation: aappbb
Pattern: x[ADS][GKR][EY][AKL][gp][krt][cm][py]
Conservation:-0.5440.7600.8361.966-0.729-0.159-1.275-0.518-0.336
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1afr_A_3431afr   A344352RAKEAPTMPHHHT--EEEaaaaxxxbx
1gk8_A_771gk8   A7785LDRYKGRCYHHHH--EEEaaaaxxbxa
1jr1_A_4761jr1   A484492YSGELKFEKHHS-S-EEEaagaxbbbx
1rbl_A_771rbl   A7785MDRYKGKCYHHHH--EEEaaaaxxbxa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gk8_A_771gk8   A     EGLETHYLENE GLYCOL L - 77
1gk8_A_771gk8   A     HYP4-HYDROXYPROLINE D - 78
1gk8_A_771gk8   A     HYP4-HYDROXYPROLINE R - 79
1gk8_A_771gk8   A     HYP4-HYDROXYPROLINE Y - 80
1gk8_A_771gk8   A     HYP4-HYDROXYPROLINE K - 81
1gk8_A_771gk8   A     HYP4-HYDROXYPROLINE G - 82
1gk8_A_771gk8   A     HYP4-HYDROXYPROLINE R - 83

Clusters included in this Subclass
CLUSTER: HE.3.112