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Information on SUBCLASS 2.5.8
Subclass Accession number: 8255
Subclass: 2.5.8 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 8.8 +/- 9.4
Average RMSD (Å) : 0.833 +/- 0.115

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XcXXhp
(φψ)-conformation: aappbb
Pattern: [GVW]xxx[ADK][AMT]x[EK]x[LT]x[GK]x[DPR][ILV][KNT][NV][GLV][ITV]
Conservation:-0.591-0.957-1.566-0.591-0.3470.0180.2332.332-0.8350.852-0.7130.964-0.713-0.2251.7240.506-0.006-0.9570.871
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1lbv_A_441lbv   A4866VAEDAALEILRKERVTVVTHHHHHHHHHHTTSSEEEEEaaaaaaaaaaaaxxbbxbb
1mg5_A_171mg5   A1735GIGLDTSKELLKRDLKNLVHHHHHHHHHHTTS--SEEEaaaaaaaaaaaaxxxabbb
4ubp_C_1764ubp   C178196WNIEKMLKSTEGLPINVGIHHHHHHHHHHTT-SSEEEEaaaaaaaaaaaabxbxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mg5_A_171mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 17
1mg5_A_171mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 18
1mg5_A_171mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 19
1mg5_A_171mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 37
1mg5_A_171mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 38

Clusters included in this Subclass
CLUSTER: HE.5.306