ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.5.1

Subclass Accession number: 826
Subclass: 8.5.1

Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.5 (>75 %)  3.5.1 (>75 %)  3.5.1.1 (>75 %)
GO : GO:0004067 (>75 %)  GO:0016810 (>75 %)  GO:0016811 (>75 %)
SCOP : 53773 (>75 %)  53774 (>75 %)  53775 (>75 %)

Number of loops: 4

Average sequence ID (%) : 9.0 +/- 12.2
Average RMSD (Å) : 0.825 +/- 0.450

Consensus geometry

d (Å): 5

delta (°): 90-135

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	phhpXcpccXXh
(φψ)-conformation:	bbppaaallpbb

Pattern:	x	[ALV]	[AGL]	[NPST]	x	[ADN]	[DRST]	[DGK]	x	x	x	[FTVY]	x
Conservation:	-1.253	1.591	-0.095	0.572	-1.253	1.386	-0.210	0.778	-0.992	-1.122	0.288	0.311	-1.000

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bdy_A_27	1bdy	A	34	46	EALTTDRGKTLVQ	EE--GGGTT-EEE	bxxxaaavlxxbx
1fi2_A_103	1fi2	A	108	120	ILGSLDSGNKLYS	EE--GGGTT-EEE	bbxxaaavlxbxb
1fid_*_266	1fid	-	266	277	KVGPEADKYRLT.	EE--GGGTT-EE.	bbxxaaallpxb.
1nrj_A_47	1nrj	A	47	59	SVANANTDGFDFN	EE-SGGGTT--EE	xbbbaaalvxxbb

Clusters included in this Subclass

CLUSTER: HA.8.16