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Information on SUBCLASS 8.11.1
Subclass Accession number: 832
Subclass: 8.11.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.2 (>50 %)  1.2.1 (>50 %)  1.2.1.22.6 (>75 %)  2.6.1 (>75 %)  2.6.1.1
GO : GO:0004069 (>50 %)  GO:0004730 (>75 %)  GO:0005507 (>75 %)  GO:0008483 (>75 %)  GO:0008863 (>50 %)  GO:0016620 (>50 %)  GO:0016769 (>75 %)  GO:0016829 (>75 %)  GO:0016829 (>75 %)  GO:0016835 (>75 %)  GO:0016836 (>75 %)  GO:0016846 (>75 %)  GO:0016847 (>75 %)  GO:0016903 (>50 %)  GO:0030151 (>50 %)  GO:0046914 (>50 %)  GO:0046914 (>75 %)  
SCOP : 100877 (>75 %)  49502 (>75 %)  49503 (>75 %)  49550 (>75 %)  53382 (>75 %)  53383 (>75 %)  53384 (>75 %)  53705 (>50 %)  53706 (>50 %)  53707 (>50 %)  55120 (>75 %)  69746 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 23.3 +/- 17.3
Average RMSD (Å) : 1.533 +/- 0.681

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: pXXXphXXGhXh
(φψ)-conformation: bbpaapaagpbb
Pattern: [EK][EGK][IV]x[NT][FTV][CT][PT][KY][AC][AKS]x[G][CF][EGK][IL]x[LMP]xx
Conservation:0.568-0.7740.830-0.9080.583-0.8471.0170.5130.1801.235-0.554-1.0672.4540.799-0.7740.526-0.799-0.774-1.067-1.140
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aa6_*_21aa6   -221KKVVTVCPYCASGCKINLVVEEEEEE-SSBTT--EEEEEEbbbxbbpaaxaavpxbxxxb
1b8a_A_711b8a   A7594EGVVNFTPKAKLGFEILPEKEEEEEE-TTSTTSEEEEEEEbbbxbxbaaxaagbbbxwab
1kqf_A_441kqf   A4463KEIRNTCTYCSVGCGLLMYSEEEEEE-SSBTT--EEEEEExbbxbbpaaxaavpxbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aa6_*_21aa6   *     FS4IRON/SULFUR CLUSTER C - 8
1aa6_*_21aa6   *     FS4IRON/SULFUR CLUSTER P - 9
1aa6_*_21aa6   *     FS4IRON/SULFUR CLUSTER Y - 10
1aa6_*_21aa6   *     FS4IRON/SULFUR CLUSTER C - 11
1aa6_*_21aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE C - 11
1aa6_*_21aa6   *     FS4IRON/SULFUR CLUSTER A - 12
1aa6_*_21aa6   *     FS4IRON/SULFUR CLUSTER S - 13
1aa6_*_21aa6   *     FS4IRON/SULFUR CLUSTER G - 14
1aa6_*_21aa6   *     FS4IRON/SULFUR CLUSTER C - 15
1aa6_*_21aa6   *     FS4IRON/SULFUR CLUSTER I - 17
1kqf_A_441kqf   A     FS4IRON/SULFUR CLUSTER C - 50
1kqf_A_441kqf   A     FS4IRON/SULFUR CLUSTER T - 51
1kqf_A_441kqf   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE T - 51
1kqf_A_441kqf   A     FS4IRON/SULFUR CLUSTER Y - 52
1kqf_A_441kqf   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE Y - 52
1kqf_A_441kqf   A     FS4IRON/SULFUR CLUSTER C - 53
1kqf_A_441kqf   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE C - 53
1kqf_A_441kqf   A     FS4IRON/SULFUR CLUSTER S - 54
1kqf_A_441kqf   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE S - 54
1kqf_A_441kqf   A     FS4IRON/SULFUR CLUSTER V - 55
1kqf_A_441kqf   A     FS4IRON/SULFUR CLUSTER G - 56
1kqf_A_441kqf   A     FS4IRON/SULFUR CLUSTER C - 57
1kqf_A_441kqf   A     FS4IRON/SULFUR CLUSTER L - 59
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1aa6_*_21aa6   * FS4THE IRON SULFUR CLUSTER IS COORDINATED TO THE SULFUR ATOMS OF CYS 8, CYS 11, CYS 15, AND CYS 42.C - 8
1aa6_*_21aa6   * FS4THE IRON SULFUR CLUSTER IS COORDINATED TO THE SULFUR ATOMS OF CYS 8, CYS 11, CYS 15, AND CYS 42.C - 11
1aa6_*_21aa6   * FS4THE IRON SULFUR CLUSTER IS COORDINATED TO THE SULFUR ATOMS OF CYS 8, CYS 11, CYS 15, AND CYS 42.C - 15

Clusters included in this Subclass
CLUSTER: HA.7.67