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Information on SUBCLASS 3.4.7
Subclass Accession number: 8335
Subclass: 3.4.7 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 35.3 +/- 33.4
Average RMSD (Å) : 0.720 +/- 0.335

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXphXhX
(φψ)-conformation: aalppbb
Pattern: xxxxxxxxxxxxxxxxx
Conservation:-0.434-0.022-0.075-1.7501.154-1.052-0.849-0.123-0.2201.908-1.1490.846-0.376-0.5740.1851.0021.527
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aup_*_1001aup   -111127AFKDSLTTLPMGGAKGGHHHHHHTSS---EEEEEaaaaaaavxxbxbbbbe
1bgv_A_1001bgv   A111127AFKDSLTTLPMGGAKGGHHHHHHTSSS--EEEEEaaaaaaavxxbxbbbbe
1gtm_A_791gtm   A90106TWKTAVMDLPYGGGKGGHHHHHHTT-S-EEEEEEaaaaaaalxxbbbbbbb
1hwx_A_1011hwx   A112128TYKCAVVDVPFGGAKAGHHHHHHTT---EEEEEEaaaaaaalbxbxxbbbb
1k38_A_271k38   A2743RKFFSEFQAKGTIVVADHHHHHHTT--EEEEEEEaaaaaaalbbbbbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bgv_A_1001bgv   A     GLUGLUTAMIC ACID Q - 110
1bgv_A_1001bgv   A     GLUGLUTAMIC ACID K - 113
1bgv_A_1001bgv   A     GLUGLUTAMIC ACID D - 114
1bgv_A_1001bgv   A     GLUGLUTAMIC ACID K - 125
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE L - 107
1hwx_A_1011hwx   A     GLUGLUTAMIC ACID M - 111
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE T - 112
1hwx_A_1011hwx   A     GLUGLUTAMIC ACID K - 114
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE K - 114
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE C - 115
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE A - 116
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE V - 118
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE D - 119
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE V - 120
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE P - 121
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE F - 122
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE G - 123
1hwx_A_1011hwx   A     GLUGLUTAMIC ACID A - 125
1hwx_A_1011hwx   A     GLUGLUTAMIC ACID K - 126
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE K - 126

Clusters included in this Subclass
CLUSTER: HE.4.145
CLUSTER: HE.5.126