Information on SUBCLASS 3.6.2 |
Subclass Accession number: 8345
Subclass: 3.6.2 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 12.4 +/- 14.3 Average RMSD (Å) : 0.757 +/- 0.264 Consensus geometry
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Consensus Sequence: | pXXPpXX |
(φψ)-conformation: | aabaabb |
Pattern: | [agrs] | x | [FGKMV] | [HILV] | [aeknq] | [ekrt] | [ailvw] | x | [EHKQR] | x | x | [EP] | [DKQR] | [acpstv] | x | [ALPV] | x | [flvy] |
Conservation: | -0.337 | -0.517 | -0.630 | 0.187 | -0.314 | -0.097 | -0.526 | 0.258 | 0.909 | -0.933 | -0.318 | 3.472 | 0.779 | -0.507 | -0.766 | 0.082 | -0.645 | -0.097 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cza_N_423 | 1cza | N | 425 | 442 | RRFHKTLRRLVPDSDVRF | HHHHHHHHHH-TTEEEEE | aaaaaaaaaabaabbbbb |
1cza_N_871 | 1cza | N | 873 | 890 | RIMHQTVKELSPKCNVSF | HHHHHHHHHHSTTEEEEE | aaaaaaaaaabaabbbbb |
1f3t_A_45 | 1f3t | A | 49 | 66 | VRKHETWKKCLPRVTPFY | HHHHHHHHHH-TTEEEEE | aaaaaaaaaabaabxwbp |
1f89_A_25 | 1f89 | A | 33 | 50 | ATFIERAMKEQPDTKLVV | HHHHHHHHHH-TTEEEEE | aaaaaaaaaabaaxabbb |
1i7q_B_37 | 1i7q | B | 37 | 54 | AEVIIERLQHMEQPVLML | HHHHHHHHHH-SSEEEEE | aaaaaaaaaaxaapbxbb |
1jys_A_155 | 1jys | A | 155 | 172 | SVGLAKIRHNFPQAIAVE | HHHHHHHHHH-TTEEEEE | aaaaaaaaaabaaxabbb |
1r6w_A_139 | 1r6w | A | 143 | 160 | GMVVNLLLEAIPDLHLRL | HHHHHHHHHH-TTEEEEE | aaaaaaaaaabaaxbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cza_N_423 | 1cza | N | ADPADENOSINE-5'-DIPHOSPHATE | R - 425 |
1cza_N_423 | 1cza | N | ADPADENOSINE-5'-DIPHOSPHATE | R - 426 |
1cza_N_423 | 1cza | N | ADPADENOSINE-5'-DIPHOSPHATE | K - 429 |
1f3t_A_45 | 1f3t | A | PLPPYRIDOXAL-5'-PHOSPHATE | A - 67 |
1jys_A_155 | 1jys | A | ADEADENINE | V - 171 |
1jys_A_155 | 1jys | A | ADEADENINE | E - 172 |
1r6w_A_139 | 1r6w | A | 1642-(3-CARBOXYPROPIONYL)-6-HYDROXY-CYCLOHEXA-2,4-DIENE CARBOXYLIC ACID | R - 159 |
1r6w_A_139 | 1r6w | A | MGMAGNESIUM ION | D - 161 |
1r6w_A_139 | 1r6w | A | 1642-(3-CARBOXYPROPIONYL)-6-HYDROXY-CYCLOHEXA-2,4-DIENE CARBOXYLIC ACID | D - 161 |
Clusters included in this Subclass |
CLUSTER: HE.2.54 |