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Information on SUBCLASS 3.6.2
Subclass Accession number: 8345
Subclass: 3.6.2 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 12.4 +/- 14.3
Average RMSD (Å) : 0.757 +/- 0.264

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pXXPpXX
(φψ)-conformation: aabaabb
Pattern: [agrs]x[FGKMV][HILV][aeknq][ekrt][ailvw]x[EHKQR]xx[EP][DKQR][acpstv]x[ALPV]x[flvy]
Conservation:-0.337-0.517-0.6300.187-0.314-0.097-0.5260.2580.909-0.933-0.3183.4720.779-0.507-0.7660.082-0.645-0.097
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cza_N_4231cza   N425442RRFHKTLRRLVPDSDVRFHHHHHHHHHH-TTEEEEEaaaaaaaaaabaabbbbb
1cza_N_8711cza   N873890RIMHQTVKELSPKCNVSFHHHHHHHHHHSTTEEEEEaaaaaaaaaabaabbbbb
1f3t_A_451f3t   A4966VRKHETWKKCLPRVTPFYHHHHHHHHHH-TTEEEEEaaaaaaaaaabaabxwbp
1f89_A_251f89   A3350ATFIERAMKEQPDTKLVVHHHHHHHHHH-TTEEEEEaaaaaaaaaabaaxabbb
1i7q_B_371i7q   B3754AEVIIERLQHMEQPVLMLHHHHHHHHHH-SSEEEEEaaaaaaaaaaxaapbxbb
1jys_A_1551jys   A155172SVGLAKIRHNFPQAIAVEHHHHHHHHHH-TTEEEEEaaaaaaaaaabaaxabbb
1r6w_A_1391r6w   A143160GMVVNLLLEAIPDLHLRLHHHHHHHHHH-TTEEEEEaaaaaaaaaabaaxbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cza_N_4231cza   N     ADPADENOSINE-5'-DIPHOSPHATE R - 425
1cza_N_4231cza   N     ADPADENOSINE-5'-DIPHOSPHATE R - 426
1cza_N_4231cza   N     ADPADENOSINE-5'-DIPHOSPHATE K - 429
1f3t_A_451f3t   A     PLPPYRIDOXAL-5'-PHOSPHATE A - 67
1jys_A_1551jys   A     ADEADENINE V - 171
1jys_A_1551jys   A     ADEADENINE E - 172
1r6w_A_1391r6w   A     1642-(3-CARBOXYPROPIONYL)-6-HYDROXY-CYCLOHEXA-2,4-DIENE CARBOXYLIC ACID R - 159
1r6w_A_1391r6w   A     MGMAGNESIUM ION D - 161
1r6w_A_1391r6w   A     1642-(3-CARBOXYPROPIONYL)-6-HYDROXY-CYCLOHEXA-2,4-DIENE CARBOXYLIC ACID D - 161

Clusters included in this Subclass
CLUSTER: HE.2.54