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Information on SUBCLASS 3.6.4
Subclass Accession number: 8347
Subclass: 3.6.4 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 12.3 +/- 12.8
Average RMSD (Å) : 1.000 +/- 0.265

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: ppphpVX
(φψ)-conformation: aabaabb
Pattern: [ELM]xx[EST]x[IMV]x[EQR]xx[ER][DNQ][HRY][GP][DS][V]x[IL]x
Conservation:-0.538-1.062-1.324-0.014-0.8000.772-0.7130.597-0.713-1.2370.9130.4230.5100.9661.1541.908-1.0621.195-0.975
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a05_A_1951a05   A199217LWREVVTEVARDYPDVRLSHHHHHHHHHGGG-TTSEEEaaaaaaaaaaaabaabxxb
1e6u_A_141e6u   A1432MVGSAIRRQLEQRGDVELVHHHHHHHHHHTT-TTEEEEaaaaaaaaaaaabaabbxb
1jz7_A_4331jz7   A438456ERVTRMVQRDRNHPSVIIWHHHHHHHHHHTT-TTEEEEaaaaaaaaaaaaxaaxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e6u_A_141e6u   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 14
1e6u_A_141e6u   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 15
1e6u_A_141e6u   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 16
1e6u_A_141e6u   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL S - 17
1e6u_A_141e6u   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL R - 20
1e6u_A_141e6u   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL R - 21
1jz7_A_4331jz7   A     DMSDIMETHYL SULFOXIDE R - 448
1jz7_A_4331jz7   A     DMSDIMETHYL SULFOXIDE N - 449
1jz7_A_4331jz7   A     DMSDIMETHYL SULFOXIDE H - 450
1jz7_A_4331jz7   A     DMSDIMETHYL SULFOXIDE P - 451
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e6u_A_141e6u   A AC1NAP BINDING SITE FOR CHAIN AM - 14

Clusters included in this Subclass
CLUSTER: HE.6.227