Logo
Information on SUBCLASS 3.8.2
Subclass Accession number: 8357
Subclass: 3.8.2 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 12.7 +/- 12.2
Average RMSD (Å) : 1.067 +/- 0.115

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: ppXXhXX
(φψ)-conformation: aabapbb
Pattern: x[DER][EKR][FGV][ATV][EH]x[IL][EKW][E]x[LMT][HK][DQ]x[ENP][IVW][KV]x[AIL]x
Conservation:-0.6330.1060.568-1.187-0.1711.203-1.2791.202-0.3562.785-0.633-0.0790.8361.264-0.910-0.263-0.171-0.201-0.818-0.263-1.002
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a0e_A_1111a0e   A118138LDKVVERIKERMKDSNVKLLWHHHHHHHHHHHHHHSS-EEEEaaaaaaaaaaaaaabaxbxab
1e9i_A_2691e9i   A269289SEEFTHFLEELTKQYPIVSIEHHHHHHHHHHHHHHS-EEEEEaaaaaaaaaaaaaabaxabbx
1f8m_A_471f8m   A4969ARRGAEVLWEQLHDLEWVNALHHHHHHHHHHHHHHSS-EEEEaaaaaaaaaaaaaababbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a0e_A_1111a0e   A     COCOBALT (II) ION W - 138
1e9i_A_2691e9i   A     MGMAGNESIUM ION E - 289

Clusters included in this Subclass
CLUSTER: HE.3.194