Information on SUBCLASS 4.1.4 |
Subclass Accession number: 8409
Subclass: 4.1.4 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 14.5 +/- 16.6 Average RMSD (Å) : 0.773 +/- 0.245 Consensus geometry
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Consensus Sequence: | pXXPphXh |
(φψ)-conformation: | aabaapbb |
Pattern: | x | [aikmtv] | [himv] | x | [ADENQT] | [ailvw] | [fklv] | [AEKQR] | x | x | [lp] | [DGKNQRST] | [acpvy] | x | [FILPVY] | [afilmtv] | [FGLVY] |
Conservation: | -1.185 | -0.501 | -0.103 | -0.674 | 0.171 | -0.461 | -0.366 | 1.434 | -0.905 | -0.769 | 3.101 | 0.019 | -0.139 | -0.372 | 0.466 | 0.148 | 0.137 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1auo_A_31 | 1auo | A | 32 | 48 | PVAEALQESLLTTRFVL | HHHHHHHTT-TTEEEEE | aaaaaaaaaxaabxbbx |
1cza_N_871 | 1cza | N | 874 | 890 | IMHQTVKELSPKCNVSF | HHHHHHHHHSTTEEEEE | aaaaaaaaabaabbbbb |
1f3t_A_45 | 1f3t | A | 50 | 66 | RKHETWKKCLPRVTPFY | HHHHHHHHH-TTEEEEE | aaaaaaaaabaabxwbp |
1i0z_A_110 | 1i0z | A | 119 | 135 | FIIPQIVKYSPDCIIIV | HHHHHHHHH-TT-EEEE | aaaaaaaaabaaxbbbx |
1i7q_B_37 | 1i7q | B | 38 | 54 | EVIIERLQHMEQPVLML | HHHHHHHHH-SSEEEEE | aaaaaaaaaxaapbxbb |
1lld_A_93 | 1lld | A | 106 | 122 | AIMPNLVKVAPNAIYML | HHHHHHHHH-TTSEEEE | aaaaaaaaabaaxxbbb |
1m6y_A_37 | 1m6y | A | 37 | 53 | GHSRAILEHCPGCRIIG | HHHHHHHHH-TT-EEEE | aaaaaaaaabaaxbbbb |
1mg5_A_43 | 1mg5 | A | 44 | 60 | AAIAELKAINPKVTVTF | HHHHHHHHH-TTSEEEE | aaaaaaaaabaaxxbbb |
1tib_*_111 | 1tib | - | 126 | 142 | QKVEDAVREHPDYRVVF | HHHHHHHHH-TTSEEEE | aaaaaaaaabaaxxbbb |
3tgl_*_109 | 3tgl | - | 124 | 140 | ATVLDQFKQYPSYKVAV | HHHHHHHHH-TTSEEEE | aaaaaaaaabaaxxbbb |
9ldt_A_113 | 9ldt | A | 122 | 138 | FIIPNIVKYSPNCKLLV | HHHHHHHHH-TT-EEEE | aaaaaaaaabaaxbxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.3.54 |
CLUSTER: HE.4.50 |