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Information on SUBCLASS 4.1.5
Subclass Accession number: 8410
Subclass: 4.1.5 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 11.3 +/- 14.1
Average RMSD (Å) : 0.829 +/- 0.472

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXpXXXXh
(φψ)-conformation: aabaapbb
Pattern: x[ltvy][akqt][IKV][DENQT][kpt][dehktw][aqrs]x[ikl]x
Conservation:-1.399-0.0960.0851.0622.0870.541-1.174-0.084-0.4020.195-0.815
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dle_A_231dle   A2333DYHKQPWQAKIHHHH-TTEEEEaaaabaaxbbb
1g71_A_2811g71   A282292RVTVDIKRILRHHHH-TT-EEEaaaaxaapbbp
1ges_A_3781ges   A379389YTAVTTHRQPCHHHTSSS--EEaaaabaaxbxb
1ii2_A_111ii2   A1827ALKIEKDSRL.HHHH-TT-EE.aaaaxaaxbb.
1o94_A_4411o94   A454464LLKKNKESQLAHHHHSTT-EEEaaaabaaxbbb
1ols_B_231ols   B3444SLAKDPTAVIFHHHH-TT-EEEaaaabaaxbbb
2nap_A_1822nap   A191201RKQVEPGVKIIHHHH-TT-EEEaaaabaapbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
2nap_A_1822nap   A     FS4IRON/SULFUR CLUSTER P - 182
2nap_A_1822nap   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE P - 182
2nap_A_1822nap   A     FS4IRON/SULFUR CLUSTER V - 183
2nap_A_1822nap   A     FS4IRON/SULFUR CLUSTER L - 184
2nap_A_1822nap   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE A - 203

Clusters included in this Subclass
CLUSTER: HE.4.125
CLUSTER: HE.5.123