Information on SUBCLASS 4.1.10 |
Subclass Accession number: 8415
Subclass: 4.1.10 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 33.3 +/- 29.5 Average RMSD (Å) : 0.700 +/- 0.265 Consensus geometry
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Consensus Sequence: | XXpXcAXV |
(φψ)-conformation: | aabaapbb |
Pattern: | [AV] | [EL] | [DE] | [AL] | x | x | [EKL] | x | [DH] | [DP] | [DKN] | [A] | [KRW] | [V] | [AK] | [CR] |
Conservation: | 0.057 | -0.944 | 1.462 | -0.327 | -1.521 | -1.175 | -1.002 | -0.854 | 0.767 | 0.704 | -0.050 | 1.595 | -0.396 | 1.595 | -0.175 | 0.266 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gpj_A_62 | 1gpj | A | 62 | 77 | AEELGDLIHDDAWVKR | HHHHHHTT-TT-EEEE | aaaaaaaabaapxbbb |
1mxa_*_15 | 1mxa | - | 26 | 41 | VLDAILEQDPKARVAC | HHHHHHTT-TT-EEEE | aaaaaaaabaapxbbb |
1qm4_A_31 | 1qm4 | A | 42 | 57 | VLDAHLKQDPNAKVAC | HHHHHHTT-TT-EEEE | aaaaaaaabaapbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mxa_*_15 | 1mxa | * | POPPYROPHOSPHATE 2- | A - 40 |
1mxa_*_15 | 1mxa | * | PO4PHOSPHATE ION | E - 42 |
1mxa_*_15 | 1mxa | * | POPPYROPHOSPHATE 2- | E - 42 |
1mxa_*_15 | 1mxa | * | MGMAGNESIUM ION | E - 42 |
1qm4_A_31 | 1qm4 | A | AMBL-2-AMINO-4-METHOXY-CIS-BUT-3-ENOIC ACID | P - 31 |
1qm4_A_31 | 1qm4 | A | MGMAGNESIUM ION | P - 31 |
Clusters included in this Subclass |
CLUSTER: HE.6.184 |