Information on SUBCLASS 9.9.1 |
Subclass Accession number: 842
Subclass: 9.9.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.7 (>50 %) 1.7.2 (>50 %) 1.7.2.1 GO : GO:0005489 (>75 %) GO:0005507 (>50 %) GO:0005507 (>75 %) GO:0016661 (>50 %) GO:0016662 (>50 %) GO:0046914 (>50 %) GO:0046914 (>75 %) GO:0050421 (>50 %) SCOP : 49502 (>50 %) 49502 (>75 %) 49503 (>50 %) 49503 (>75 %) 49504 (>75 %) 49550 (>50 %) 56671 (>75 %) 56672 (>75 %) 56673 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 52.4 +/- 2.9 Average RMSD (Å) : 0.267 +/- 0.058 Consensus geometry
|
Consensus Sequence: | hpCpPHpXhcMXG |
(φψ)-conformation: | bbpaaaaaalpbb |
Pattern: | [G] | x | [Y] | [GST] | [FV] | [KY] | [C] | [ST] | [P] | [H] | [KQY] | [GS] | [AM] | [GN] | [M] | [KV] | [G] | [KTV] | [LV] | [QT] | [V] |
Conservation: | 0.915 | -1.121 | 1.314 | -0.899 | -0.566 | -0.553 | 2.110 | -0.297 | 1.314 | 1.712 | -0.899 | -0.374 | -0.778 | -0.240 | 0.517 | -0.970 | 0.915 | -1.121 | -0.459 | -0.639 | 0.119 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bqk_*_72 | 1bqk | - | 72 | 92 | GVYGVKCTPHYGMGMVGVVQV | EEEEEE-TTTGGGT-EEEEEE | exbxbbxaaaaaavxbbbbxb |
1kdj_*_81 | 1kdj | - | 81 | 101 | GTYTFYCTPHKSANMKGTLTV | EEEEEE-STTGGGT-EEEEEE | ebbxbbxaaaaaalxbbbbbb |
1plc_*_78 | 1plc | - | 78 | 98 | GEYSFYCSPHQGAGMVGKVTV | EEEEEE-GGGTTTT-EEEEEE | ebbxbbbaaaaaavxbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bqk_*_72 | 1bqk | * | CUCOPPER (II) ION | C - 78 |
1bqk_*_72 | 1bqk | * | CUCOPPER (II) ION | T - 79 |
1bqk_*_72 | 1bqk | * | CUCOPPER (II) ION | P - 80 |
1bqk_*_72 | 1bqk | * | CUCOPPER (II) ION | H - 81 |
1bqk_*_72 | 1bqk | * | CUCOPPER (II) ION | M - 86 |
1kdj_*_81 | 1kdj | * | CUCOPPER (II) ION | C - 87 |
1kdj_*_81 | 1kdj | * | CUCOPPER (II) ION | T - 88 |
1kdj_*_81 | 1kdj | * | CUCOPPER (II) ION | P - 89 |
1kdj_*_81 | 1kdj | * | CUCOPPER (II) ION | H - 90 |
1kdj_*_81 | 1kdj | * | CUCOPPER (II) ION | M - 95 |
1plc_*_78 | 1plc | * | CUCOPPER (II) ION | C - 84 |
1plc_*_78 | 1plc | * | CUCOPPER (II) ION | S - 85 |
1plc_*_78 | 1plc | * | CUCOPPER (II) ION | P - 86 |
1plc_*_78 | 1plc | * | CUCOPPER (II) ION | H - 87 |
1plc_*_78 | 1plc | * | CUCOPPER (II) ION | M - 92 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1bqk_*_72 | 1bqk | * | COPOXIDIZED COPPER COORDINATION | C - 78 |
1bqk_*_72 | 1bqk | * | COPOXIDIZED COPPER COORDINATION | H - 81 |
1bqk_*_72 | 1bqk | * | COPOXIDIZED COPPER COORDINATION | M - 86 |
Clusters included in this Subclass |
CLUSTER: HA.8.26 |