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Information on SUBCLASS 4.2.6
Subclass Accession number: 8422
Subclass: 4.2.6 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 15.3 +/- 17.5
Average RMSD (Å) : 0.842 +/- 0.297

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: ppcXhpXh
(φψ)-conformation: aalababb
Pattern: [dekqrty]x[FHILV][DEKNQRS][denqrs][DGKNQ]x[AFILY][dpqst]x[iltvw]
Conservation:-0.656-1.2790.1931.289-0.2321.827-1.0730.7060.045-1.0650.244
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c0d_A_2681c0d   A269279YLFNQNIAPVWHHHHTTSS-EEaaaaalabxbb
1cp2_A_1341cp2   A134144MPIREGKAQEIHHHHTTS--EEaaaaavababb
1dc1_A_2861dc1   A294304DQLQSGSLTNSHHHHHTSS-EEaaaaavababb
1ddg_A_4991ddg   A504514RYVKEGVLTRIHHHHTTS--EEaaaaavaxabb
1e9y_B_3411e9y   B349359TLHDMGAFSITHHHHTTS--EEaaaaavaxabb
1ejx_C_13391ejx   C13471357VLHDLGAFSLTHHHHTTSS-EEaaaaavababb
1gkr_A_2911gkr   A299309EQLENGLIDTLHHHHHT---EEaaaaavababb
1gve_A_1171gve   A126136QLHQEGKFVELHHHHTTSEEEEaaaaavababx
1ivy_A_3501ivy   A355365KLLSSQKYQILHHHHHT--EEEaaaaalabxbb
1ja1_A_5761ja1   A581591RFHKDGALTQLHHHHTTSSSEEaaaaavababb
1oyw_A_2721oyw   A280290EKFQRDDLQIVHHHHTTS-SEEaaaaavababb
1rhs_*_1641rhs   -169179ENLESKRFQLVHHHHH--SEEEaaaaavabxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gve_A_1171gve   A     GOLGLYCEROL I - 117
1gve_A_1171gve   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 139
1ja1_A_5761ja1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 594
1ja1_A_5761ja1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE F - 595
1rhs_*_1641rhs   *     CSSS-MERCAPTOCYSTEINE V - 179
1rhs_*_1641rhs   *     CSSS-MERCAPTOCYSTEINE D - 180
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gve_A_1171gve   A AC1NAP BINDING SITE FOR CHAIN AS - 139

Clusters included in this Subclass
CLUSTER: HE.4.59