Information on SUBCLASS 4.4.4 |
Subclass Accession number: 8435
Subclass: 4.4.4 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 8.3 +/- 10.9 Average RMSD (Å) : 0.733 +/- 0.058 Consensus geometry
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Consensus Sequence: | pXXpXXXX |
(φψ)-conformation: | aabappbb |
Pattern: | [IK] | [EQT] | [AD] | [AL] | [AEK] | [EQR] | x | [CFT] | [DKS] | [EGQ] | [DP] | x | x | [FLV] | x | [ALM] |
Conservation: | -0.759 | 0.340 | 0.129 | 0.467 | -0.182 | 1.383 | -1.051 | -0.529 | -0.008 | -0.182 | 2.863 | -1.051 | -0.529 | 0.166 | -1.051 | -0.008 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dqw_A_128 | 1dqw | A | 134 | 149 | KQAAEEVTKEPRGLLM | HHHHHHH-SS--EEEE | aaaaaaabaxxbbbbx |
1jbw_A_318 | 1jbw | A | 325 | 340 | ITALKQLFSQPITVIA | HHHHHHH-SS--EEEE | aaaaaaababwbbbbb |
1p4c_A_115 | 1p4c | A | 115 | 130 | IEDLARQCDGDLWFQL | HHHHHHH--S-EEEEE | aaaaaaabaxxbbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jbw_A_318 | 1jbw | A | ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | D - 319 |
1jbw_A_318 | 1jbw | A | ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | G - 320 |
1jbw_A_318 | 1jbw | A | ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | I - 321 |
1jbw_A_318 | 1jbw | A | ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | G - 323 |
1jbw_A_318 | 1jbw | A | ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | L - 324 |
1p4c_A_115 | 1p4c | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | Q - 121 |
1p4c_A_115 | 1p4c | A | FMNFLAVIN MONONUCLEOTIDE | Q - 129 |
Clusters included in this Subclass |
CLUSTER: HE.4.315 |