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Information on SUBCLASS 4.5.2
Subclass Accession number: 8437
Subclass: 4.5.2 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 15.9 +/- 26.7
Average RMSD (Å) : 0.900 +/- 0.167

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XppXpXXh
(φψ)-conformation: aapaapbb
Pattern: xx[adeq]x[ckv][kprs][dnsy]x[knrs]xx[gilv][cglv]
Conservation:-0.617-0.5731.683-0.733-0.3810.9990.323-0.0681.819-0.288-1.5200.293-0.937
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dnp_A_171dnp   A1931LAAACRNSSARVLHHHHSSSTTSEEEaaaaaaxaaxxbb
1jy1_A_2321jy1   A239251HAQAKPYENISLCHHHHTT-TTEEEEaaaaaabaabbbb
1o9l_A_4261o9l   A426438AMDLVSSAKTKVVHHHHT--SSSEEEaaaaaaxaaxxxb
1o9l_B_4261o9l   B426438AMDLVSSAKTKVVHHHHT--TTSEEEaaaaaaxaabxbb
1oya_*_3301oya   -333345VREEVKDKRTLIGHHHHTTSTTEEEEaaaaaaxaabbbx
2hvm_*_2402hvm   -240252LPEIKKSPKYGGVHHHHTTSTTEEEEaaaaaaxaapaeb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o9l_B_4261o9l   B     EMT2-(ETHYLMERCURI-THIO)-BENZOIC ACID M - 427
1o9l_A_4261o9l   A     EMCETHYL MERCURY ION V - 430
1o9l_B_4261o9l   B     EMT2-(ETHYLMERCURI-THIO)-BENZOIC ACID V - 430
1o9l_A_4261o9l   A     EMCETHYL MERCURY ION S - 431
1o9l_A_4261o9l   A     EMCETHYL MERCURY ION S - 432
1o9l_A_4261o9l   A     EMCETHYL MERCURY ION A - 433
1o9l_B_4261o9l   B     EMT2-(ETHYLMERCURI-THIO)-BENZOIC ACID V - 439
1oya_*_3301oya   *     FMNFLAVIN MONONUCLEOTIDE G - 345
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o9l_A_4261o9l   A AC1EMC BINDING SITE FOR CHAIN AA - 433

Clusters included in this Subclass
CLUSTER: HE.5.92