Information on SUBCLASS 4.5.4 |
Subclass Accession number: 8439
Subclass: 4.5.4 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 8.9 +/- 12.8 Average RMSD (Å) : 0.825 +/- 0.236 Consensus geometry
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Consensus Sequence: | XcpXpXXp |
(φψ)-conformation: | aapaappb |
Pattern: | x | [EFY] | x | [AKV] | x | x | [DGKN] | [DQS] | x | [ADST] | [AIK] | x | x | x | x |
Conservation: | 0.716 | 0.744 | -0.120 | 0.368 | -0.419 | -1.219 | 0.495 | 2.246 | -1.562 | 0.495 | -0.394 | -0.876 | -0.474 | -1.000 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1iw7_C_584 | 1iw7 | C | 584 | 596 | EERVVRDSLAALY.. | HHHHHHHTT-SEE.. | aaaaaaaxaaxxb.. |
1l3s_A_355 | 1l3s | A | 356 | 370 | QFVAWLGDETKKKSM | HHHHHHH-TTSEEEE | aaaaaaaxaaxxbbb |
1m7x_A_231 | 1m7x | A | 231 | 245 | EERKKANQFDAPISI | HHHHHHHSTTS--EE | aaaaaaapaabwbbx |
1rlr_*_372 | 1rlr | - | 378 | 392 | LYTKYEKDDSIRKQR | HHHHHHH-TTS-EEE | aaaaaaapaaxxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1iw7_C_584 | 1iw7 | C | MGMAGNESIUM ION | E - 585 |
1iw7_C_584 | 1iw7 | C | MGMAGNESIUM ION | R - 586 |
1iw7_C_584 | 1iw7 | C | MGMAGNESIUM ION | R - 589 |
1iw7_C_584 | 1iw7 | C | MGMAGNESIUM ION | Y - 596 |
Clusters included in this Subclass |
CLUSTER: HE.5.147 |