Information on SUBCLASS 4.5.5 |
Subclass Accession number: 8440
Subclass: 4.5.5 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 13.3 +/- 13.6 Average RMSD (Å) : 0.800 +/- 0.300 Consensus geometry
|
Consensus Sequence: | XpphXhXh |
(φψ)-conformation: | aapaapbb |
Pattern: | [EPT] | [AL] | [AKV] | x | x | [LV] | x | [KQ] | [DR] | [LP] | x | [FGM] | [AEN] | [AL] | x |
Conservation: | -0.178 | 0.400 | -0.695 | -0.954 | -0.954 | 1.481 | -0.178 | 2.120 | 0.990 | 0.803 | -0.824 | -0.954 | -0.436 | 0.461 | -1.083 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ivy_A_152 | 1ivy | A | 158 | 172 | TLAVLVMQDPSMNLQ | HHHHHHTT-TTS-EE | aaaaaaaabaaxxxa |
1kae_A_212 | 1kae | A | 216 | 230 | EAKRQVSQRLDGAAI | HHHHHHHH-TTS-EE | aaaaaaaaxaabbxb |
1vgv_A_18 | 1vgv | A | 18 | 32 | PLVHALAKDPFFEAK | HHHHHHHHSTT--EE | aaaaaaaaxaaxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kae_A_212 | 1kae | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | A - 212 |
1kae_A_212 | 1kae | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | F - 213 |
1kae_A_212 | 1kae | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 214 |
1kae_A_212 | 1kae | A | MSESELENOMETHIONINE | K - 218 |
1kae_A_212 | 1kae | A | MSESELENOMETHIONINE | I - 230 |
1vgv_A_18 | 1vgv | A | MSESELENOMETHIONINE | P - 18 |
1vgv_A_18 | 1vgv | A | MSESELENOMETHIONINE | L - 19 |
1vgv_A_18 | 1vgv | A | MSESELENOMETHIONINE | V - 20 |
1vgv_A_18 | 1vgv | A | MSESELENOMETHIONINE | H - 21 |
1vgv_A_18 | 1vgv | A | MSESELENOMETHIONINE | F - 28 |
1vgv_A_18 | 1vgv | A | MSESELENOMETHIONINE | F - 29 |
1vgv_A_18 | 1vgv | A | MSESELENOMETHIONINE | E - 30 |
1vgv_A_18 | 1vgv | A | MSESELENOMETHIONINE | A - 31 |
Clusters included in this Subclass |
CLUSTER: HE.6.259 |