Information on SUBCLASS 4.11.1 |
Subclass Accession number: 8449
Subclass: 4.11.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 7.9 +/- 8.7 Average RMSD (Å) : 0.767 +/- 0.058 Consensus geometry
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Consensus Sequence: | XXXXhXXX |
(φψ)-conformation: | aababpbb |
Pattern: | [PTV] | [ADN] | [AFI] | [GLM] | x | [KQ] | [AGI] | [CLT] | [AQR] | [AKQ] | [AV] | x | x | x | x | x | [GL] | x | [LT] | [QTW] | [ACF] |
Conservation: | -0.161 | -0.161 | -0.445 | -0.871 | -0.587 | 2.516 | -1.013 | 0.122 | 0.122 | 0.122 | 1.258 | -0.871 | -1.155 | 2.327 | -0.729 | -0.871 | 0.067 | -0.445 | 0.813 | -0.020 | -0.020 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ccw_B_127 | 1ccw | B | 128 | 148 | VNFGVKGCRKVLEAVNLPLQA | HHHHHHHHHHHHHH-SS-EEE | aaaeaaaaaaaaaababxbbx |
1e8c_A_361 | 1e8c | A | 361 | 381 | PDALEKALQAARLHCAGKLWC | HHHHHHHHHHHHHT-SS-EEE | aaaaaaaaaaaaaabaxxbbb |
1h7b_A_105 | 1h7b | A | 109 | 129 | TAIMAQITAQVASHQYGGTTF | HHHHHHHHHHHHTTSSS-EEE | aaaaaaaaaaaaaababxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ccw_B_127 | 1ccw | B | TARD(-)-TARTARIC ACID | R - 149 |
1e8c_A_361 | 1e8c | A | MSESELENOMETHIONINE | P - 361 |
1e8c_A_361 | 1e8c | A | MSESELENOMETHIONINE | L - 364 |
1e8c_A_361 | 1e8c | A | MSESELENOMETHIONINE | K - 366 |
1e8c_A_361 | 1e8c | A | MSESELENOMETHIONINE | A - 367 |
1e8c_A_361 | 1e8c | A | MSESELENOMETHIONINE | L - 368 |
1e8c_A_361 | 1e8c | A | MSESELENOMETHIONINE | A - 370 |
1e8c_A_361 | 1e8c | A | MSESELENOMETHIONINE | A - 371 |
1e8c_A_361 | 1e8c | A | MSESELENOMETHIONINE | R - 372 |
1e8c_A_361 | 1e8c | A | MSESELENOMETHIONINE | H - 374 |
1e8c_A_361 | 1e8c | A | MSESELENOMETHIONINE | F - 383 |
Clusters included in this Subclass |
CLUSTER: HE.5.276 |