ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.14.5

Subclass Accession number: 8456
Subclass: 4.14.5

Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1 (>75 %)  11 (>50 %)
GO : GO:0004601 (>75 %)  GO:0016684 (>75 %)
SCOP : 53473 (>75 %)  53474 (>75 %)  53531 (>75 %)

Number of loops: 3

Average sequence ID (%) : 54.5 +/- 0.5
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry

d (Å): 11

delta (°): 90-135

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	ppGThRhX
(φψ)-conformation:	aaeaaaba

Pattern:	[GT]	[G]	[E]	[LV]	[A]	[R]	[Y]	[IV]	[GS]	[RS]	[HY]	[G]	[T]	[AG]	[R]	[ILV]	[AR]	[KS]	[AV]	[AGV]	[FL]	[IL]
Conservation:	-0.973	1.462	0.864	-0.596	0.267	0.864	2.059	-0.017	-0.497	-0.988	0.804	1.462	0.864	-0.688	0.864	-0.529	-1.074	-0.672	-0.897	-1.591	-0.686	-0.301

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a8q_*_96	1a8q	-	97	118	GGELARYVGRHGTGRLRSAVLL	HHHHHHHHHHH-STTEEEEEEE	aaaaaaaaaaaeaaababbbbb
1a8s_*_95	1a8s	-	97	118	GGEVARYIGRHGTARVAKAGLI	HHHHHHHHHHH-STTEEEEEEE	aaaaaaaaaaaeaaababbbbb
1brt_*_101	1brt	-	101	122	TGEVARYVSSYGTARIAKVAFL	HHHHHHHHHHH-STTEEEEEEE	aaaaaaaaaaaeaaababbbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1a8s_*_95	1a8s	*	PPIPROPANOIC ACID	T - 95
1a8s_*_95	1a8s	*	PPIPROPANOIC ACID	G - 96

Clusters included in this Subclass

CLUSTER: HE.3.206