Information on SUBCLASS 4.16.2 |
Subclass Accession number: 8461
Subclass: 4.16.2 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 25.0 +/- 29.9 Average RMSD (Å) : 1.400 +/- 0.141 Consensus geometry
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Consensus Sequence: | pXXhXPhX |
(φψ)-conformation: | aapabpbb |
Pattern: | [FIV] | [fl] | [DK] | [QTY] | [AV] | [AFK] | [KS] | [AQST] | [lv] | [afp] | x | [P] | [LV] | [FIT] | [ALV] | [GSV] |
Conservation: | 0.218 | -0.572 | 0.728 | -0.367 | 0.286 | -0.733 | 0.503 | -0.280 | -0.519 | -1.048 | -0.792 | 3.155 | 0.637 | -0.320 | -0.175 | -0.722 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bxo_A_140 | 1bxo | A | 140 | 155 | FFDTVKSSLAQPLFAV | HHHHHGGGBSSSEEEE | aaaaaaaaxabxbbbb |
1djx_A_366 | 1djx | A | 373 | 388 | IRDYAFKASPYPVILS | HHHHTTTS-SS-EEEE | aaaaaaaabaxpbbbx |
1ibq_A_139 | 1ibq | A | 139 | 154 | FFDTVKSQLDSPLFAV | HHHHHGGGSSSSEEEE | aaaaaaaaxabxbbbb |
1jvn_A_311 | 1jvn | A | 315 | 330 | VLKQAAKTVFVPLTVG | HHHHHTTT--S-EEEE | aaaaaaaaxabpbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bxo_A_140 | 1bxo | A | MANALPHA-D-MANNOSE | A - 149 |
1bxo_A_140 | 1bxo | A | MANALPHA-D-MANNOSE | Q - 150 |
1djx_A_366 | 1djx | A | I3PD-MYO-INOSITOL-1,4,5-TRIPHOSPHATE | S - 388 |
1djx_A_366 | 1djx | A | I3PD-MYO-INOSITOL-1,4,5-TRIPHOSPHATE | L - 389 |
1djx_A_366 | 1djx | A | I3PD-MYO-INOSITOL-1,4,5-TRIPHOSPHATE | E - 390 |
1djx_A_366 | 1djx | A | CACALCIUM ION | E - 390 |
1djx_A_366 | 1djx | A | I3PD-MYO-INOSITOL-1,4,5-TRIPHOSPHATE | H - 392 |
1ibq_A_139 | 1ibq | A | ZNZINC ION | Q - 146 |
1ibq_A_139 | 1ibq | A | ZNZINC ION | L - 147 |
1ibq_A_139 | 1ibq | A | ZNZINC ION | D - 148 |
Clusters included in this Subclass |
CLUSTER: HE.8.26 |