Information on SUBCLASS 4.19.1 |
Subclass Accession number: 8475
Subclass: 4.19.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 20.4 +/- 21.6 Average RMSD (Å) : 0.529 +/- 0.240 Consensus geometry
|
Consensus Sequence: | hhpGXpXh |
(φψ)-conformation: | aapgpabb |
Pattern: | x | x | [acgikltv] | [afikltv] | x | [dgn] | x | [denqs] | x | [ilv] | [ilpvy] |
Conservation: | -0.954 | -0.628 | -0.549 | -0.424 | -0.373 | 1.911 | -0.677 | 0.373 | -0.486 | 1.892 | -0.085 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1az9_*_113 | 1az9 | - | 118 | 128 | YQLLNGLDVVY | HHHHTT-SEEE | aaaapvxabbx |
1bfd_*_257 | 1bfd | - | 261 | 271 | SQLLEGHDVVL | HHHHTT-SEEE | aaaapgxabbb |
1duv_G_218 | 1duv | G | 219 | 229 | AKGVEGADFIY | HHHHTT-SEEE | aaaapvxabbb |
1h3f_A_8 | 1h3f | A | 13 | 23 | ALLKRGAEEIV | HHHHTT-SEEE | aaaapvxabbb |
1hdo_A_58 | 1hdo | A | 62 | 72 | DKTVAGQDAVI | HHHHTT-SEEE | aaaapvxabbb |
1j1u_A_3 | 1j1u | A | 5 | 15 | EMIKRNTSEII | HHHHTT-SEEE | aaaapvxabbb |
1js1_X_223 | 1js1 | X | 224 | 234 | MKAFEGADFIY | HHHHTT-SEEE | aaaapvxabbb |
1mld_A_62 | 1mld | A | 63 | 73 | PDCLKGCDVVV | HHHHTT-SEEE | aaaaxvxabbb |
1n3l_A_7 | 1n3l | A | 12 | 22 | HLITRNLQEVL | HHHHTT-SEEE | aaaaxvxabbb |
1n8y_C_17 | 1n8y | C | 25 | 35 | RHLYQGCQVVQ | HHHHTT-SEEE | aaaaxvxabxx |
1n8z_C_17 | 1n8z | C | 25 | 35 | RHLYQGCQVVQ | HHHHTT--EEE | aaaaxvxabxx |
1nwc_A_321 | 1nwc | A | 321 | 331 | PAKVTGTLSVP | HHHHTTSS-EE | aaaapvbaxbx |
1obb_A_71 | 1obb | A | 72 | 82 | DDVIIDADFVI | HHHHTT-SEEE | aaaapvxabbb |
1oth_A_250 | 1oth | A | 251 | 261 | LEAAHGGNVLI | HHHHTT-SEEE | aaaapvxabxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1n3l_A_7 | 1n3l | A | GOLGLYCEROL | H - 12 |
1n3l_A_7 | 1n3l | A | GOLGLYCEROL | R - 16 |
1n3l_A_7 | 1n3l | A | GOLGLYCEROL | N - 17 |
1n8y_C_17 | 1n8y | C | NAGN-ACETYL-D-GLUCOSAMINE | Q - 32 |
1obb_A_71 | 1obb | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | L - 71 |
Clusters included in this Subclass |
CLUSTER: HE.5.31 |