Information on SUBCLASS 4.22.2 |
Subclass Accession number: 8483
Subclass: 4.22.2 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>75 %) 2.1 (>75 %) 2.1.1 (>75 %) 2.1.1.77 GO : GO:0008168 (>75 %) GO:0008171 (>75 %) GO:0008276 (>75 %) GO:0008757 (>75 %) GO:0016741 (>75 %) SCOP : 53334 (>75 %) 53335 (>75 %) 53354 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 18.4 +/- 16.6 Average RMSD (Å) : 0.375 +/- 0.050 Consensus geometry
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Consensus Sequence: | XhGXphXh |
(φψ)-conformation: | aaeaapbb |
Pattern: | x | x | [ASTV] | x | [CLVY] | [FMV] | x | [RTW] | x | [IV] | [G] | x | [EKT] | [GM] | x | [IV] | [IKV] | [AGS] | x |
Conservation: | -1.270 | -1.150 | -0.268 | -0.277 | -0.388 | 0.292 | -0.589 | -0.346 | -0.228 | 1.357 | 2.898 | -0.789 | 0.145 | 0.522 | -0.949 | 1.357 | -0.133 | 0.246 | -0.428 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dl5_A_88 | 1dl5 | A | 88 | 106 | YNAAVMSRVVGEKGLVVSV | HHHHHHHHHH-TT-EEEEE | aaaaaaaaaaeaaxbbbbb |
1ej0_A_64 | 1ej0 | A | 64 | 82 | GWSQYVVTQIGGKGRIIAC | HHHHHHHHHH-TT-EEEEE | aaaaaaaaaaeaaxbbbbb |
1i1n_A_90 | 1i1n | A | 90 | 108 | ILTACFARMVGCTGKVIGI | HHHHHHHHHH-TT-EEEEE | aaaaaaaaaaeaaxbbbbb |
1o0y_A_191 | 1o0y | A | 192 | 210 | EDVHLMKWIVGDEMGVKAS | HHHHHHHHHH-TTSEEEEE | aaaaaaaaaaeaabxbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dl5_A_88 | 1dl5 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | Y - 88 |
1dl5_A_88 | 1dl5 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | N - 89 |
1dl5_A_88 | 1dl5 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | A - 90 |
1dl5_A_88 | 1dl5 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | S - 105 |
1dl5_A_88 | 1dl5 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | V - 106 |
1dl5_A_88 | 1dl5 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | E - 107 |
1ej0_A_64 | 1ej0 | A | SAMS-ADENOSYLMETHIONINE | G - 64 |
1ej0_A_64 | 1ej0 | A | SAMS-ADENOSYLMETHIONINE | W - 65 |
1ej0_A_64 | 1ej0 | A | SAMS-ADENOSYLMETHIONINE | S - 66 |
1ej0_A_64 | 1ej0 | A | HGMERCURY (II) ION | A - 81 |
1ej0_A_64 | 1ej0 | A | HGMERCURY (II) ION | C - 82 |
1ej0_A_64 | 1ej0 | A | SAMS-ADENOSYLMETHIONINE | C - 82 |
1ej0_A_64 | 1ej0 | A | HGMERCURY (II) ION | D - 83 |
1ej0_A_64 | 1ej0 | A | SAMS-ADENOSYLMETHIONINE | D - 83 |
1i1n_A_90 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | I - 90 |
1i1n_A_90 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | L - 91 |
1i1n_A_90 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | I - 108 |
1i1n_A_90 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 109 |
Clusters included in this Subclass |
CLUSTER: HE.5.136 |