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Information on SUBCLASS 4.25.3
Subclass Accession number: 8488
Subclass: 4.25.3 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0016835 (>75 %)  GO:0016836 (>75 %)  
Number of loops: 4

Average sequence ID (%) : 14.8 +/- 13.3
Average RMSD (Å) : 0.900 +/- 0.183

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXhpGpXh
(φψ)-conformation: aappepbb
Pattern: x[DP]x[FL]xxx[AL]xxx[HPQR][G][ESY]xx[AGLV]x
Conservation:-0.7191.457-0.6410.970-0.680-0.367-0.4840.298-0.445-0.719-0.7970.0253.1150.071-0.680-0.367-0.4840.444
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1af7_*_1021af7   -103120FPILAEHARRRHGEYRVWHHHHHHHHHHS-S-EEEEaaaaaaaaaapxexxbbb
1kkc_A_1221kkc   A126143KDAFNTTLLGIQGSGWGWHHHHHHHHHH--SSEEEEaaaaaaaaaaxxexbbbb
1qop_A_1601qop   A160177DDLLRQVASYGRGYTYLLHHHHHHHHHH--S-EEEEaaaaaaaaaaxbGbbxbx
1r6w_A_1141r6w   A114131PDDLILKLADMPGEKVAKHHHHHHHHHT--SSEEEEaaaaaaaaaaxxexxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1af7_*_1021af7   *     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 121
1kkc_A_1221kkc   A     MNMANGANESE (II) ION W - 141
1qop_A_1601qop   A     IPLINDOLE-3-PROPANOL PHOSPHATE Y - 175
1qop_A_1601qop   A     IPLINDOLE-3-PROPANOL PHOSPHATE L - 177
1r6w_A_1141r6w   A     MGMAGNESIUM ION K - 131
1r6w_A_1141r6w   A     1642-(3-CARBOXYPROPIONYL)-6-HYDROXY-CYCLOHEXA-2,4-DIENE CARBOXYLIC ACID K - 131
1r6w_A_1141r6w   A     1642-(3-CARBOXYPROPIONYL)-6-HYDROXY-CYCLOHEXA-2,4-DIENE CARBOXYLIC ACID R - 133
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1qop_A_1601qop   A IPLSUBSTRATE ANALOG BOUND TO THE ALPHA ACTIVE SITE.Y - 175

Clusters included in this Subclass
CLUSTER: HE.4.206